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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154515773 on build GRCh38
Cytoband
Xq28
Assay ID Hs02178313_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
AK024601.1
AK057945.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss F8A1 MECP2 FAM3A TAZ LOC107987332 SPRY3 MPP1 IKBKG PLXNA3 IRAK1 F8 SLC10A3 EMD MIR6858 F8A3 OPN1MW2 MTCP1 MIR3202-1 H2AFB2 ATP6AP1 G6PD CTAG1B CH17-340M24.3 SMIM9 LOC105373386 DNASE1L1 MIR1184-2 OPN1MW UBL4A CMC4 VBP1 RPL10 BRCC3 DKC1 SNORA36A TMEM187 TKTL1 F8A2 RAB39B HCFC1 MIR718 FLNA MIR664B FAM50A OPN1MW3 H2AFB1 CTAG2 HCFC1-AS1 MIR1184-1 SNORA70 GDI1 LAGE3 GAB3 CTAG1A FUNDC2 FAM223B TMLHE-AS1 OPN1LW LOC101927830 TEX28 H2AFB3 FAM223A MIR1184-3 MIR3202-2 SNORA56 CLIC2 TMLHE
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain TKTL1 MECP2 FAM3A TAZ LOC107987332 FLNA FAM50A IKBKG PLXNA3 OPN1MW3 SLC10A3 EMD MIR6858 OPN1MW2 SNORA70 ATP6AP1 G6PD GDI1 LAGE3 CH17-340M24.3 LOC105373386 DNASE1L1 CTAG1A OPN1MW UBL4A OPN1LW TEX28 RPL10 FAM223A
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss RENBP SSR4 MECP2 LOC105373377 FAM3A TAZ LOC107987332 LOC107983954 ATP2B3 BGN IKBKG PLXNA3 IRAK1 TREX2 PNCK SLC10A3 PDZD4 EMD MIR6858 OPN1MW2 MIR3202-1 ATP6AP1 G6PD IDH3G FAM58A CH17-340M24.3 LOC105373386 L1CAM DNASE1L1 OPN1MW UBL4A RPL10 DUSP9 PLXNB3 TMEM187 TKTL1 HCFC1 MIR718 LOC105373383 SRPK3 LOC105373378 FLNA FAM50A ZNF275 OPN1MW3 MAGEA1 ZFP92 HCFC1-AS1 NAA10 SNORA70 GDI1 LAGE3 BCAP31 CTAG1A ARHGAP4 LOC105373381 ABCD1 SLC6A8 HAUS7 OPN1LW LCA10 TEX28 AVPR2 FAM223A PNMA6A MIR3202-2
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion IKBKG CTAG1A FAM3A FAM223A G6PD

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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