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See other DGCR8 CNV Assays ›
Gene Symbol
DGCR8
Assay Reference Genome
Location

Chr.22:20111862 on build GRCh38
Cytoband
22q11.21
Assay ID Hs02179842_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 54487

Gene Name:

 DGCR8 microprocessor complex subunit

Gene Aliases:

 C22orf12, DGCRK6, Gy1, pasha

Location:

 Chr.22:20080232-20111877 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DGCR8 NM_001190326.1 NP_001177255.1
NM_022720.6 NP_073557.3
XM_006724268.2 XP_006724331.1
AA737782.1
AK025427.1
AK025539.1 BAB15165.1
AK025780.1 BAB15238.1
AK094381.1
AY189282.1 AAO86726.1
BC009323.2 AAH09323.2
BC078147.1 AAH78147.1
BQ001948.1
BX649187.1 CAE46205.2

Target Gene Details

Entrez Gene ID:

 27037

Gene Name:

 tRNA methyltransferase 2 homolog A

Gene Aliases:

 HTF9C

Location:

 Chr.22:20111866-20117305 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRMT2A NM_001257994.1 NP_001244923.1
NM_022727.5 NP_073564.3
NM_182984.4 NP_892029.2
XM_011530139.2 XP_011528441.1
XM_011530141.1 XP_011528443.1
XM_011530142.2 XP_011528444.1
XM_017028770.1 XP_016884259.1
AI539558.1
BC017184.2 AAH17184.2
CA440188.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv726n67 Chr.22:20070444 - 20324465 on Build GRCh38 Gain LINC00896 TRMT2A LOC440792 MIR3618 RANBP1 CCDC188 MIR6816 DGCR8 LOC284865 RTN4R MIR1286 MIR1306 DGCR6L ZDHHC8
esv3893434 Chr.22:19470889 - 20343372 on Build GRCh38 Gain LINC00896 LOC101927859 MIR3618 MIR4761 RANBP1 MIR6816 DGCR8 TANGO2 LOC284865 LINC00895 COMT GNB1L DGCR6L TXNRD2 SEPT5-GP1BB TRMT2A LOC440792 SEPT5 MIR185 CCDC188 CLDN5 TBX1 UFD1L ARVCF RTN4R MIR1286 C22orf29 GP1BB MIR1306 CDC45 ZDHHC8
esv3647284 Chr.22:19985583 - 20137122 on Build GRCh38 Gain TRMT2A ARVCF MIR3618 MIR185 MIR1306 RANBP1 MIR6816 DGCR8 TANGO2 ZDHHC8
nsv828938 Chr.22:19691069 - 20324465 on Build GRCh38 Gain LINC00896 MIR3618 MIR4761 RANBP1 MIR6816 DGCR8 TANGO2 LOC284865 COMT GNB1L DGCR6L TXNRD2 SEPT5-GP1BB TRMT2A LOC440792 SEPT5 MIR185 CCDC188 TBX1 ARVCF RTN4R MIR1286 C22orf29 GP1BB MIR1306 ZDHHC8
nsv828939 Chr.22:19696032 - 20324465 on Build GRCh38 Loss LINC00896 MIR3618 MIR4761 RANBP1 MIR6816 DGCR8 TANGO2 LOC284865 COMT GNB1L DGCR6L TXNRD2 SEPT5-GP1BB TRMT2A LOC440792 SEPT5 MIR185 CCDC188 TBX1 ARVCF RTN4R MIR1286 C22orf29 GP1BB MIR1306 ZDHHC8
esv2758825 Chr.22:20038970 - 20321924 on Build GRCh38 Loss LINC00896 TRMT2A LOC440792 MIR3618 RANBP1 CCDC188 MIR6816 DGCR8 TANGO2 LOC284865 RTN4R MIR1286 MIR1306 DGCR6L ZDHHC8
dgv4480n100 Chr.22:20069620 - 20262667 on Build GRCh38 Gain LINC00896 TRMT2A RTN4R MIR1286 MIR3618 MIR1306 RANBP1 CCDC188 MIR6816 DGCR8 ZDHHC8 LOC284865
nsv471183 Chr.22:20018517 - 20319470 on Build GRCh38 Loss LINC00896 TRMT2A LOC440792 MIR3618 MIR185 RANBP1 CCDC188 MIR6816 DGCR8 TANGO2 LOC284865 RTN4R MIR1286 MIR1306 DGCR6L ZDHHC8
dgv7983n54 Chr.22:19762002 - 20321870 on Build GRCh38 Gain LINC00896 TRMT2A LOC440792 MIR3618 MIR185 MIR4761 RANBP1 CCDC188 MIR6816 DGCR8 TANGO2 TBX1 LOC284865 ARVCF RTN4R MIR1286 C22orf29 COMT GNB1L MIR1306 DGCR6L TXNRD2 ZDHHC8
nsv834133 Chr.22:20029363 - 20176708 on Build GRCh38 Loss TRMT2A MIR3618 MIR185 MIR1306 RANBP1 CCDC188 MIR6816 DGCR8 TANGO2 ZDHHC8
nsv953027 Chr.22:20085378 - 20303977 on Build GRCh38 Deletion LINC00896 TRMT2A LOC440792 MIR3618 RANBP1 CCDC188 MIR6816 DGCR8 LOC284865 RTN4R MIR1286 MIR1306 ZDHHC8

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