Hs02192702_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67873294 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4	1	272	NP_055144.3
	AK128582.1	1	243
	AK291049.1	1	40
	BC043616.1	1	175	AAH43616.1
	BC064567.1	1	169	AAH64567.1
	BX445706.2	1	224
	DC403765.1	1	273
	L26339.1	1	168	AAA21833.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	EXOC3L1 GFOD2 ZDHHC1 FAM65A LRRC36 TSNAXIP1 TMEM208 PLEKHG4 DPEP3 SLC12A4 LOC100131303 ELMO3 HSF4 NOL3 LOC100505942 PARD6A NRN1L TRADD FHOD1 ATP6V0D1 LRRC29 DDX28 DUS2 LOC105369155 C16orf86 THAP11 E2F4 FBXL8 PSKH1 MIR328 ENKD1 CARMIL2 RANBP10 KIAA0895L EDC4 NUTF2 LOC107984813 ACD AGRP CENPT KCTD19 SLC9A5 TPPP3 DPEP2 PSMB10 CTRL HSD11B2 CTCF LCAT
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	EDC4 NUTF2 NRN1L PSKH1
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	EXOC3L1 GFOD2 C16orf70 ZDHHC1 FAM65A LRRC36 TSNAXIP1 B3GNT9 TMEM208 PLEKHG4 DPEP3 SLC12A4 LOC100131303 ELMO3 HSF4 NOL3 LOC100505942 PARD6A NRN1L TRADD FHOD1 ATP6V0D1 LRRC29 DDX28 DUS2 LOC105369155 C16orf86 THAP11 E2F4 FBXL8 PSKH1 MIR328 ENKD1 CARMIL2 RANBP10 KIAA0895L EDC4 NUTF2 LOC107984813 ACD AGRP CENPT KCTD19 SLC9A5 TPPP3 DPEP2 PSMB10 CTRL HSD11B2 CTCF LCAT

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding