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See other THOC1 CNV Assays ›
Gene Symbol
THOC1
Assay Reference Genome
Location

Chr.18:224135 on build GRCh38
Cytoband
18p11.32
Assay ID Hs02192832_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9984

Gene Name:

 THO complex 1

Gene Aliases:

 HPR1, P84, P84N5

Location:

 Chr.18:214348-268059 on Build GRCh38

Assay Gene Location:

 Within Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
THOC1 NM_005131.2 NP_005122.2
XM_011525772.2 16 1314 XP_011524074.1
XM_011525773.1 17 1344 XP_011524075.1
XM_011525774.2 6 1885 XP_011524076.1
XM_017026103.1 13 2834 XP_016881592.1
AK055354.1
AK123530.1
AK225067.1
AK225709.1
AK314755.1
BC010381.1 AAH10381.1
L36529.1 AAA53571.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv3303n100 Chr.18:219990 - 290812 on Build GRCh38 Gain THOC1
nsv576227 Chr.18:52933 - 322183 on Build GRCh38 Gain USP14 COLEC12 MIR8078 THOC1 ROCK1P1
esv3641475 Chr.18:153985 - 282924 on Build GRCh38 Gain USP14 THOC1
nsv518642 Chr.18:196829 - 331506 on Build GRCh38 Gain USP14 COLEC12 THOC1
dgv3301n100 Chr.18:11543 - 326679 on Build GRCh38 Gain USP14 COLEC12 MIR8078 THOC1 ROCK1P1
nsv1064150 Chr.18:99036 - 321710 on Build GRCh38 Gain USP14 COLEC12 MIR8078 THOC1 ROCK1P1
nsv1160503 Chr.18:200576 - 249255 on Build GRCh38 Duplication USP14 THOC1
nsv482935 Chr.18:10001 - 2900002 on Build GRCh38 Loss ADCYAP1 NDC80 LOC105376854 USP14 LINC00470 COLEC12 TYMSOS MIR8078 THOC1 CLUL1 ENOSF1 LOC388456 METTL4 ROCK1P1 LOC101926997 TYMS EMILIN2 CETN1 SMCHD1 YES1 CBX3P2
nsv576228 Chr.18:69836 - 1506323 on Build GRCh38 Loss ADCYAP1 LOC105376854 USP14 LINC00470 COLEC12 TYMSOS MIR8078 THOC1 CLUL1 ENOSF1 LOC388456 ROCK1P1 TYMS CETN1 YES1
esv3641472 Chr.18:128077 - 323706 on Build GRCh38 Loss USP14 COLEC12 THOC1
dgv3302n100 Chr.18:136228 - 249310 on Build GRCh38 Gain USP14 THOC1

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More Information


Additional Information:

For this assay, SNP(s) [rs80319001] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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