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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2046320 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02202674_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 2 208 NP_001305122.1
NM_001318194.1 2 208 NP_001305123.1
NM_002528.6 2 208 NP_002519.1
XM_017023253.1 2 211 XP_016878742.1
AB001575.1 2 172 BAA19413.1
BC000391.2 2 165 AAH00391.2
BC003014.1 2 165 AAH03014.1
BE900738.1 2 90
BG468617.1 2 134
HY057336.1 2 185
HY094895.1 2 211
U79718.1 2 205 AAB41534.1
U81285.1 2 170 AAC51136.1
Y09687.1 2 162 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HS3ST6 LOC105371045 MSLN WDR90 LOC107984876 TELO2 CAPN15 E4F1 TPSG1 CEMP1 RPS2 CACNA1H MIR6859-4 FLJ42627 DECR2 LMF1 SNHG19 MIR6511B1 CCDC154 RHOT2 MAPK8IP3 NARFL LINC00235 MIR4717 RAB40C PDPK1 CCNF HBM UBE2I ABCA3 RPL3L ATP6V0C HBZ TBL3 SLC9A3R2 MIR6767 MIR5587 RAB26 RPUSD1 ARHGDIG NTN3 LMF1-AS1 TMEM8A MIR3178 SNORA10 WDR24 RHBDF1 PRR35 MIR3180-5 RAB11FIP3 AMDHD2 PRR25 TBC1D24 NME3 KCTD5 LOC100287175 HBA1 MEIOB PIGQ LINC00254 CCDC78 NUBP2 MCRIP2 MIR662 SNHG9 BRICD5 TRAF7 MIR940 LOC100134368 ECI1 MIR6768 ABCA17P IGFALS UNKL SSTR5 PDIA2 HAGH NDUFB10 LUC7L MIR3177 LOC105371046 SOX8 SNORD60 BAIAP3 SPSB3 EME2 TPSB2 PRSS29P RNPS1 CRAMP1 FAHD1 ZNF598 SSTR5-AS1 WFIKKN1 HAGHL TMEM204 MIR3176 DNASE1L2 LOC101929280 GNPTG RHBDL1 MLST8 LOC106660606 AXIN1 PGP SNORA78 WASIR2 JMJD8 LOC729652 METTL26 TSC2 FAM173A LOC105371038 NOXO1 LOC105371047 NHLRC4 TPSAB1 MRPS34 RGS11 FBXL16 NME4 MSRB1 STUB1 RNF151 LOC652276 MIR3677 HBQ1 DDX11L10 NPW PTX4 SNORA64 C16orf91 GFER SNRNP25 LOC105371049 CHTF18 PRSS27 C16orf59 C1QTNF8 LOC105371184 TSR3 GNG13 ERVK13-1 NTHL1 TPSD1 NPRL3 SYNGR3 MRPL28 RPL23AP5 MIR1225 FAM234A HBA2 PKD1 POLR3K METRN CLCN7 HN1L LOC107987233 MIR4516 IFT140 MPG CASKIN1
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss ZNF598 NOXO1 TBL3 SLC9A3R2 NTHL1 NPW SYNGR3 TSC2 GFER
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion HS3ST6 ZNF598 NOXO1 LOC105371049 TBL3 SLC9A3R2 MIR6511B1 NDUFB10 NTHL1 SYNGR3 MIR1225 MSRB1 SNORA10 RNF151 PKD1 SNORA78 SNHG9 NPW MIR4516 RPL3L TSC2 RPS2 SNORA64 GFER
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion ZNF598 NOXO1 LOC105371049 TBL3 SLC9A3R2 MIR6511B1 NDUFB10 NTHL1 SYNGR3 MIR1225 SNORA10 RNF151 PKD1 SNORA78 SNHG9 NPW TSC2 RPS2 SNORA64 GFER

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