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See other KLHL17 CNV Assays ›
Gene Symbol
KLHL17
Assay Reference Genome
Location

Chr.1:964969 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02205204_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339451

Gene Name:

 kelch like family member 17

Gene Aliases:

 -

Location:

 Chr.1:960103-965719 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KLHL17 NM_198317.2 NP_938073.1
XM_006710600.3 XP_006710663.1
AK127585.1
AY423763.1 AAR03710.1
BC105742.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain AGRN C1orf159 ISG15 LOC107985728 SAMD11 KLHL17 PLEKHN1 RNF223 LOC284600 LOC100288175 PERM1 HES4 NOC2L LOC105378948 LOC100130417
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SAMD11 LINC00115 MIR200A ATAD3A LOC100288069 SKI MMP23B MIR200B OR4F29 TMEM88B LOC100506504 TMEM240 MTND2P28 TTLL10-AS1 LOC102725121 ACAP3 LOC105378589 KLHL17 CFAP74 TAS1R3 LOC101928626 LOC148413 MIR6726 GABRD LOC107985729 LOC100129534 AGRN SDF4 MIR1302-2 LOC100288175 PERM1 FAM132A OR4F5 NADK LOC105378948 WASH7P CPSF3L CALML6 SCNN1D LOC100130417 SLC35E2 C1orf159 LOC100134822 MIR6727 CCNL2 RNF223 SLC35E2B LOC284600 TNFRSF18 LOC100287934 LOC105378947 NOC2L GNB1 LOC100133331 TMEM52 MIR6808 LOC105378949 LOC729737 PLEKHN1 LINC01342 FAM87B CDK11A DVL1 MIR6859-2 TTLL10 LOC100132287 PUSL1 MORN1 UBE2J2 TNFRSF4 MRPL20 MIB2 AURKAIP1 LINC01128 ATAD3B MMP23A MIR429 FAAP20 PRKCZ OR4F16 LOC105378591 LOC102724312 CDK11B LOC107985728 FAM138A ANKRD65 LOC105378592 VWA1 MIR6723 MIR6859-1 LOC107984841 MXRA8 ISG15 CPTP FAM41C SSU72 ATAD3C B3GALT6 HES4 MTND1P23 DDX11L1 FNDC10
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion AGRN C1orf159 ISG15 LOC107985728 SAMD11 KLHL17 PLEKHN1 RNF223 LOC284600 LOC100288175 PERM1 HES4 NOC2L LOC105378948 LOC100130417
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion PERM1 LOC107985728 SAMD11 KLHL17 NOC2L PLEKHN1 LOC284600 LOC100130417
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain AGRN LOC107985728 SAMD11 SDF4 MIR200A PLEKHN1 LINC01342 LOC100288175 PERM1 MIR200B TTLL10 LOC105378948 TNFRSF4 LOC100130417 TTLL10-AS1 C1orf159 ISG15 KLHL17 RNF223 FAM41C MIR429 LOC284600 HES4 TNFRSF18 NOC2L
nsv482036 Chr.1:960587 - 965715 on Build GRCh38 Gain KLHL17
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SAMD11 LINC00115 MIR200A MIR6808 PLEKHN1 LINC01342 FAM87B ATAD3A CDK11A LOC100288069 MMP23B DVL1 MIR200B TMEM88B TTLL10 PUSL1 TMEM240 UBE2J2 TNFRSF4 MRPL20 TTLL10-AS1 MIB2 AURKAIP1 ACAP3 LINC01128 KLHL17 ATAD3B MMP23A MIR429 TAS1R3 LOC148413 LOC102724312 MIR6726 CDK11B LOC107985729 AGRN LOC107985728 SDF4 ANKRD65 VWA1 LOC100288175 PERM1 FAM132A NADK LOC105378948 CPSF3L SCNN1D LOC100130417 MXRA8 SLC35E2 C1orf159 ISG15 CPTP MIR6727 CCNL2 RNF223 SLC35E2B FAM41C LOC284600 SSU72 ATAD3C B3GALT6 HES4 TNFRSF18 LOC100287934 NOC2L FNDC10
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain AGRN LOC107985728 LOC100133331 SAMD11 LINC00115 PLEKHN1 FAM87B MIR6723 LOC100288175 LOC100288069 PERM1 LOC105378948 LOC107984841 MTND2P28 LOC100130417 C1orf159 ISG15 LINC01128 KLHL17 RNF223 FAM41C LOC284600 LOC101928626 OR4F16 HES4 MTND1P23 LOC100287934 LOC105378947 NOC2L
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss AGRN LOC107985728 SAMD11 LINC00115 SDF4 MIR200A PLEKHN1 LINC01342 FAM87B LOC100288175 PERM1 MIR200B FAM132A TTLL10 LOC105378948 UBE2J2 TNFRSF4 LOC100130417 TTLL10-AS1 C1orf159 ISG15 LINC01128 KLHL17 RNF223 FAM41C MIR429 LOC284600 B3GALT6 HES4 TNFRSF18 NOC2L
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain AGRN C1orf159 ISG15 SAMD11 KLHL17 PLEKHN1 LINC01342 RNF223 LOC100288175 PERM1 HES4 NOC2L LOC105378948
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10-AS1 AGRN C1orf159 ISG15 SAMD11 SDF4 MIR200A KLHL17 PLEKHN1 LINC01342 RNF223 MIR429 LOC100288175 PERM1 MIR200B HES4 TNFRSF18 TTLL10 NOC2L LOC105378948 TNFRSF4
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss PERM1 AGRN ISG15 LOC107985728 HES4 SAMD11 KLHL17 NOC2L PLEKHN1 LOC284600 LOC100130417
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AGRN LOC107985728 SAMD11 SDF4 ANKRD65 MIR200A MIR6808 PLEKHN1 LINC01342 LOC100288175 PERM1 DVL1 MIR200B FAM132A TMEM88B TTLL10 LOC105378948 PUSL1 CPSF3L UBE2J2 TNFRSF4 SCNN1D LOC100130417 MRPL20 MXRA8 TTLL10-AS1 AURKAIP1 C1orf159 ISG15 CPTP ACAP3 KLHL17 MIR6727 CCNL2 RNF223 MIR429 LOC284600 B3GALT6 TAS1R3 HES4 TNFRSF18 LOC148413 MIR6726 NOC2L
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain PERM1 LOC107985728 HES4 SAMD11 LINC01128 KLHL17 NOC2L PLEKHN1 FAM41C LOC284600 LOC100130417

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More Information


Additional Information:

For this assay, SNP(s) [rs71628926] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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