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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88807296 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02232555_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 8 - Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 NP_112190.2
AB053172.1 BAB61878.1
AF070552.1
AF321125.1 AAG45181.1
BC000137.2 AAH00137.2
BC008676.1 AAH08676.1
BC008860.2 AAH08860.2
BC009410.1 AAH09410.1
BC014202.2 AAH14202.2
BC021126.1
BC049205.1 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain TRAPPC2L CBFA2T3 LOC101927793 CTU2 LOC339059 GALNS SLC22A31 ZNF778 PIEZO1 APRT LOC100289580 LOC100129697 LOC105371409 ACSF3 LOC400558 LINC00304 CDH15 LOC107987238 MIR4722 CDT1 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss TRAPPC2L CBFA2T3 LOC101927793 GALNS SLC22A31 APRT LOC100129697 LOC105371409 ACSF3 LOC400558 LINC00304 CDH15 LOC107987238 CDT1 PABPN1L
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain LOC100289580 RNF166 CTU2 LOC339059 SNAI3 GALNS LOC107987238 MIR4722 CDT1 PIEZO1 SNAI3-AS1 APRT
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ANKRD11 TRAPPC2L CBFA2T3 LOC105371414 LOC101927793 LOC339059 GALNS SLC22A31 ZNF778 PIEZO1 APRT LOC100289580 LOC100129697 LOC105371409 ACSF3 LOC400558 LINC00304 CDH15 LOC107987238 CDT1 PABPN1L LOC100287036
nsv471117 Chr.16:88805821 - 88838392 on Build GRCh38 Gain GALNS LOC107987238 CDT1 APRT
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 LOC105371409 TRAPPC2L CBFA2T3 LOC101927793 GALNS LOC107987238 CDT1 PABPN1L APRT
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss RPL13 CTU2 SNAI3 GALNS DBNDD1 SPIRE2 PIEZO1 LOC101927817 ZNF276 CDK10 IL17C SNORD68 CYBA GAS8 SLC22A31 CHMP1A VPS9D1 LOC107984817 APRT MVD LOC100129697 LOC400558 CDH15 CENPBD1 CDT1 FANCA TUBB8P7 URAHP LOC100287036 FAM157C TRAPPC2L LOC101927793 LOC339059 TCF25 LOC100289580 ACSF3 LINC00304 PRDM7 MIR4722 CPNE7 PABPN1L SPATA33 ANKRD11 DPEP1 TUBB3 SPG7 GAS8-AS1 SPATA2L CBFA2T3 LOC105371414 ZNF778 LOC105371419 SNAI3-AS1 MC1R RNF166 LOC105371409 DEF8 VPS9D1-AS1 LOC107987238 AFG3L1P
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss TRAPPC2L GALNS LOC107987238 CDT1 PIEZO1 APRT
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 LOC105371409 TRAPPC2L CBFA2T3 LOC101927793 GALNS LOC107987238 CDT1 PABPN1L PIEZO1 APRT
nsv573718 Chr.16:88807259 - 88810716 on Build GRCh38 Loss CDT1 APRT
dgv5319n54 Chr.16:88804814 - 88809520 on Build GRCh38 Loss CDT1 APRT
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain TRAPPC2L CBFA2T3 LOC101927793 GALNS LOC107987238 CDT1 PABPN1L PIEZO1 APRT
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain TRAPPC2L CBFA2T3 LOC101927793 CTU2 LOC339059 GALNS PIEZO1 APRT LOC100289580 LOC107987238 MIR4722 CDT1 PABPN1L

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