Hs02234818_cn

• Gene Symbol: MIR6816
• Assay Reference Genome Location: Chr.22:20114685 on build GRCh38
• Cytoband: 22q11.21

Target Gene Details

• Entrez Gene ID: 102465490
• Gene Name: microRNA 6816
• Gene Aliases: hsa-mir-6816
• Location: Chr.22:20114686-20114751 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6816	NR_106874.1

Target Gene Details

• Entrez Gene ID: 27037
• Gene Name: tRNA methyltransferase 2 homolog A
• Gene Aliases: HTF9C
• Location: Chr.22:20111866-20117305 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRMT2A	NM_001257994.1			NP_001244923.1
	NM_022727.5			NP_073564.3
	NM_182984.4			NP_892029.2
	XM_011530139.2			XP_011528441.1
	XM_011530141.1			XP_011528443.1
	XM_011530142.2			XP_011528444.1
	XM_017028770.1			XP_016884259.1
	AK025106.1			BAB15067.1
	AK057029.1			BAB71349.1
	BC013352.2			AAH13352.2
	BC017184.2			AAH17184.2
	BC108251.1			AAI08252.1
	CR456354.1			CAG30240.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv726n67	Chr.22:20070444 - 20324465 on Build GRCh38	Gain	CCDC188 MIR6816 LOC440792 DGCR6L MIR3618 LINC00896 MIR1306 RANBP1 MIR1286 TRMT2A ZDHHC8 DGCR8 RTN4R LOC284865
esv3647284	Chr.22:19985583 - 20137122 on Build GRCh38	Gain	TRMT2A MIR6816 MIR185 ZDHHC8 TANGO2 DGCR8 MIR3618 ARVCF MIR1306 RANBP1
esv3893434	Chr.22:19470889 - 20343372 on Build GRCh38	Gain	CCDC188 TANGO2 UFD1L CDC45 CLDN5 COMT RANBP1 GP1BB TRMT2A GNB1L MIR185 DGCR8 LINC00895 LOC284865 C22orf29 MIR4761 MIR6816 LOC440792 DGCR6L MIR3618 TBX1 LINC00896 TXNRD2 ARVCF MIR1306 MIR1286 SEPT5 ZDHHC8 LOC101927859 SEPT5-GP1BB RTN4R
nsv828939	Chr.22:19696032 - 20324465 on Build GRCh38	Loss	CCDC188 TANGO2 COMT RANBP1 GP1BB TRMT2A GNB1L MIR185 DGCR8 LOC284865 C22orf29 MIR4761 MIR6816 LOC440792 DGCR6L MIR3618 TBX1 LINC00896 TXNRD2 ARVCF MIR1306 MIR1286 SEPT5 ZDHHC8 SEPT5-GP1BB RTN4R
nsv828938	Chr.22:19691069 - 20324465 on Build GRCh38	Gain	CCDC188 TANGO2 COMT RANBP1 GP1BB TRMT2A GNB1L MIR185 DGCR8 LOC284865 C22orf29 MIR4761 MIR6816 LOC440792 DGCR6L MIR3618 TBX1 LINC00896 TXNRD2 ARVCF MIR1306 MIR1286 SEPT5 ZDHHC8 SEPT5-GP1BB RTN4R
esv2758825	Chr.22:20038970 - 20321924 on Build GRCh38	Loss	CCDC188 MIR6816 TANGO2 LOC440792 DGCR6L MIR3618 LINC00896 MIR1306 RANBP1 MIR1286 TRMT2A ZDHHC8 DGCR8 RTN4R LOC284865
dgv4480n100	Chr.22:20069620 - 20262667 on Build GRCh38	Gain	TRMT2A CCDC188 MIR6816 ZDHHC8 DGCR8 MIR3618 RTN4R LINC00896 LOC284865 MIR1306 RANBP1 MIR1286
dgv4481n100	Chr.22:20114567 - 20291605 on Build GRCh38	Gain	TRMT2A CCDC188 MIR6816 ZDHHC8 RTN4R LINC00896 LOC284865 RANBP1 MIR1286
nsv471183	Chr.22:20018517 - 20319470 on Build GRCh38	Loss	CCDC188 MIR6816 TANGO2 LOC440792 DGCR6L MIR3618 LINC00896 MIR1306 RANBP1 MIR1286 TRMT2A MIR185 ZDHHC8 DGCR8 RTN4R LOC284865
nsv834133	Chr.22:20029363 - 20176708 on Build GRCh38	Loss	TRMT2A CCDC188 MIR6816 MIR185 ZDHHC8 TANGO2 DGCR8 MIR3618 MIR1306 RANBP1
dgv7983n54	Chr.22:19762002 - 20321870 on Build GRCh38	Gain	C22orf29 MIR4761 CCDC188 MIR6816 TANGO2 LOC440792 DGCR6L MIR3618 TBX1 LINC00896 TXNRD2 COMT ARVCF MIR1306 RANBP1 MIR1286 TRMT2A GNB1L MIR185 ZDHHC8 DGCR8 RTN4R LOC284865
nsv953027	Chr.22:20085378 - 20303977 on Build GRCh38	Deletion	CCDC188 MIR6816 LOC440792 MIR3618 LINC00896 MIR1306 RANBP1 MIR1286 TRMT2A ZDHHC8 DGCR8 RTN4R LOC284865

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA methyltransferase

Gene Ontology Categories:

Process(es)

RNA methylation
RNA processing

Function(s)

nucleotide binding
RNA methyltransferase activity
poly(A) RNA binding