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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:824088 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02246940_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 7 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 NP_065109.1
XM_006718265.3 XP_006718328.1
XM_006718266.3 XP_006718329.1
XM_017018028.1 XP_016873517.1
AF055000.1 AAC09354.1
AJ278475.1 CAC01131.1
AJ278476.1 CAC01132.1
AL833707.1
AY203925.1 AAP34448.1
AY894804.1 AAW81962.1
BC011958.1 AAH11958.1
BC017280.2 AAH17280.1
HQ651812.1
JF279441.1
JF279442.1
KF601369.1
KF833264.1
KF833265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CHID1 CEND1 SLC25A22 AP2A2 CD151 PIDD1 PNPLA2 POLR2L SNORA52 TSPAN4 PANO1 CRACR2B RPLP2 PDDC1 LOC171391
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss CHID1 DEAF1 MUC5B CEND1 RASSF7 DRD4 HRAS TALDO1 AP2A2 CD151 CDHR5 SIGIRR PIDD1 EPS8L2 MUC2 MUC6 PNPLA2 SNORA52 LOC101927503 MIR6744 PHRF1 CRACR2B RPLP2 PDDC1 LOC171391 MIR210 TOLLIP-AS1 MIR210HG LRRC56 SLC25A22 LMNTD2 TOLLIP PTDSS2 SCT LOC101059906 POLR2L TSPAN4 PANO1 ANO9 LOC143666 IRF7 TMEM80 MUC5AC RNH1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CHID1 DEAF1 CEND1 RASSF7 DRD4 HRAS TALDO1 AP2A2 CD151 CDHR5 SIGIRR PIDD1 EPS8L2 PNPLA2 SNORA52 PKP3 PHRF1 CRACR2B RPLP2 B4GALNT4 PDDC1 LOC171391 MIR210 MIR210HG LRRC56 SLC25A22 LMNTD2 PTDSS2 SCT LOC101059906 POLR2L TSPAN4 PANO1 ANO9 LOC143666 IRF7 TMEM80 RNH1
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain PNPLA2 CEND1 SLC25A22 SNORA52 PANO1 CD151 PIDD1 CRACR2B RPLP2 PDDC1 LOC171391
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CHID1 DEAF1 CEND1 RASSF7 DRD4 HRAS TALDO1 CD151 CDHR5 PIDD1 EPS8L2 PNPLA2 SNORA52 PHRF1 CRACR2B RPLP2 PDDC1 LOC171391 MIR210 MIR210HG LRRC56 SLC25A22 LMNTD2 PTDSS2 SCT LOC101059906 POLR2L TSPAN4 PANO1 LOC143666 IRF7 TMEM80 RNH1
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CHID1 CEND1 SLC25A22 CD151 PIDD1 PNPLA2 POLR2L SNORA52 TSPAN4 PANO1 CRACR2B RPLP2 PDDC1 LOC171391
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss CHID1 DEAF1 MUC5B CEND1 RASSF7 DRD4 HRAS TALDO1 AP2A2 CD151 CDHR5 SIGIRR PIDD1 EPS8L2 MUC2 MUC6 PNPLA2 SNORA52 LOC101927503 PKP3 MIR6744 PHRF1 CRACR2B RPLP2 B4GALNT4 PDDC1 LOC171391 MIR210 MIR210HG LRRC56 SLC25A22 LMNTD2 TOLLIP PTDSS2 SCT LOC101059906 POLR2L TSPAN4 PANO1 ANO9 LOC143666 IRF7 TMEM80 MUC5AC RNH1
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain PNPLA2 POLR2L TSPAN4 CD151 CRACR2B RPLP2
nsv552874 Chr.11:823590 - 843713 on Build GRCh38 Gain PNPLA2 POLR2L TSPAN4 CD151 CRACR2B
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss CHID1 PNPLA2 POLR2L SNORA52 TSPAN4 AP2A2 CD151 PIDD1 CRACR2B RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CHID1 CEND1 SLC25A22 CD151 PIDD1 PNPLA2 POLR2L SNORA52 TSPAN4 PANO1 CRACR2B RPLP2 PDDC1 LOC171391
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CHID1 PNPLA2 POLR2L TSPAN4 CD151 CRACR2B
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CHID1 CEND1 SLC25A22 TALDO1 CD151 PIDD1 PNPLA2 POLR2L SNORA52 TSPAN4 PANO1 CRACR2B RPLP2 PDDC1 LOC171391

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