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See other ATP2C2 CNV Assays ›
Gene Symbol
ATP2C2
Assay Reference Genome
Location

Chr.16:84410716 on build GRCh38
Cytoband
16q24.1
Assay ID Hs02271055_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9914

Gene Name:

 ATPase secretory pathway Ca2+ transporting 2

Gene Aliases:

 SPCA2

Location:

 Chr.16:84368523-84465777 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2C2 NM_001286527.2 NP_001273456.2
NM_001291454.1 NP_001278383.1
NM_014861.3 NP_055676.3
XM_011523486.2 XP_011521788.1
AB014603.1 BAA31678.2
AK091051.1
AK300526.1
AK316128.1
AY791884.1 AAV54193.1
BX648333.1 CAI46049.1
CR749829.1 CAH18686.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv1064677 Chr.16:84384525 - 84462657 on Build GRCh38 Loss ATP2C2 LOC105371374
nsv1060813 Chr.16:84406267 - 84430850 on Build GRCh38 Loss ATP2C2
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss WFDC1 COTL1 TLDC1 ATP2C2 LOC105371374
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
dgv169n21 Chr.16:84346305 - 84480735 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv573427 Chr.16:84367244 - 84435705 on Build GRCh38 Loss ATP2C2
nsv471107 Chr.16:84378250 - 84455427 on Build GRCh38 Gain ATP2C2
dgv3057n100 Chr.16:84378422 - 84500091 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv1066356 Chr.16:84401623 - 84438300 on Build GRCh38 Loss ATP2C2
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LOC105376777 KCNG4 MIR5093 MTHFSD GINS2 COX4I1 FLJ30679 LOC101928474 KIAA0513 FAM92B LOC146513 LINC00311 USP10 FOXC2 FOXF1 TAF1C LOC101928614 COTL1 ZDHHC7 TLDC1 DNAAF1 CRISPLD2 MIR1910 LOC101928557 LINC00917 LOC440390 MIR6774 FOXL1 ATP2C2 LOC400548 FENDRR C16orf74 LINC01081 ADAD2 KLHL36 EMC8 LOC102724344 WFDC1 LOC105371374 LINC01082 FOXC2-AS1 GSE1 IRF8
nsv523226 Chr.16:84397270 - 84455427 on Build GRCh38 Loss ATP2C2
dgv5263n54 Chr.16:84403617 - 84435705 on Build GRCh38 Loss ATP2C2
dgv547e214 Chr.16:84253360 - 84417275 on Build GRCh38 Loss LOC105376777 WFDC1 ATP2C2
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss COTL1 TLDC1 ATP2C2 LOC105371374
nsv457600 Chr.16:84387654 - 84501190 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv1056072 Chr.16:84397757 - 84451417 on Build GRCh38 Loss ATP2C2

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