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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:825155 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02277280_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 10 2011 NP_065109.1
XM_006718265.3 9 2159 XP_006718328.1
XM_006718266.3 8 2099 XP_006718329.1
XM_017018028.1 9 1957 XP_016873517.1
AF055000.1 AAC09354.1
AJ278475.1 CAC01131.1
AJ278476.1 CAC01132.1
AL833707.1 4 1238
AY203925.1 6 2661 AAP34448.1
BC011958.1 7 1399 AAH11958.1
BC017280.2 AAH17280.1
HQ651812.1 10 2011
JF279441.1 10 2011
JF279442.1 10 2011
KF601369.1 10 2011

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain CEND1 PIDD1 AP2A2 CD151 POLR2L TSPAN4 SLC25A22 PDDC1 CRACR2B PNPLA2 RPLP2 CHID1 LOC171391 SNORA52 PANO1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss RNH1 PTDSS2 CEND1 PIDD1 AP2A2 MIR210 DEAF1 SLC25A22 MIR210HG MUC5B EPS8L2 LOC101059906 LRRC56 RASSF7 RPLP2 LOC101927503 HRAS CHID1 CDHR5 LOC171391 TOLLIP-AS1 ANO9 LOC143666 CD151 POLR2L TSPAN4 TOLLIP PDDC1 CRACR2B TALDO1 IRF7 MUC2 LMNTD2 MIR6744 PHRF1 MUC5AC PNPLA2 DRD4 SIGIRR MUC6 TMEM80 SNORA52 PANO1 SCT
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion RNH1 PTDSS2 CEND1 PIDD1 AP2A2 MIR210 DEAF1 SLC25A22 MIR210HG EPS8L2 LOC101059906 LRRC56 RASSF7 RPLP2 HRAS CHID1 CDHR5 LOC171391 ANO9 LOC143666 CD151 POLR2L TSPAN4 PDDC1 CRACR2B TALDO1 IRF7 PKP3 LMNTD2 PHRF1 PNPLA2 DRD4 SIGIRR TMEM80 B4GALNT4 SNORA52 PANO1 SCT
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain CEND1 PIDD1 PNPLA2 CD151 SLC25A22 RPLP2 PDDC1 CRACR2B LOC171391 SNORA52 PANO1
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion RNH1 PTDSS2 CEND1 PIDD1 MIR210 DEAF1 SLC25A22 MIR210HG EPS8L2 LOC101059906 LRRC56 RASSF7 RPLP2 HRAS CHID1 CDHR5 LOC171391 LOC143666 CD151 POLR2L TSPAN4 PDDC1 CRACR2B TALDO1 IRF7 LMNTD2 PHRF1 PNPLA2 DRD4 TMEM80 SNORA52 PANO1 SCT
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss CEND1 PIDD1 CD151 POLR2L TSPAN4 SLC25A22 PDDC1 CRACR2B PNPLA2 RPLP2 CHID1 LOC171391 SNORA52 PANO1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss RNH1 PTDSS2 CEND1 PIDD1 AP2A2 MIR210 DEAF1 SLC25A22 MIR210HG MUC5B EPS8L2 LOC101059906 LRRC56 RASSF7 RPLP2 LOC101927503 HRAS CHID1 CDHR5 LOC171391 ANO9 LOC143666 CD151 POLR2L TSPAN4 TOLLIP PDDC1 CRACR2B TALDO1 IRF7 PKP3 MUC2 LMNTD2 MIR6744 PHRF1 MUC5AC PNPLA2 DRD4 SIGIRR MUC6 TMEM80 B4GALNT4 SNORA52 PANO1 SCT
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain PNPLA2 CD151 POLR2L TSPAN4 RPLP2 CRACR2B
nsv552874 Chr.11:823590 - 843713 on Build GRCh38 Gain PNPLA2 CD151 POLR2L TSPAN4 CRACR2B
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PIDD1 AP2A2 PNPLA2 CD151 POLR2L TSPAN4 RPLP2 CRACR2B CHID1 SNORA52
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss CEND1 PIDD1 CD151 POLR2L TSPAN4 SLC25A22 PDDC1 CRACR2B PNPLA2 RPLP2 CHID1 LOC171391 SNORA52 PANO1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain PNPLA2 CD151 POLR2L TSPAN4 CRACR2B CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion CEND1 PIDD1 CD151 POLR2L TSPAN4 SLC25A22 PDDC1 CRACR2B TALDO1 PNPLA2 RPLP2 CHID1 LOC171391 SNORA52 PANO1

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