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See other PNPLA2 CNV Assays ›
Gene Symbol
PNPLA2
Assay Reference Genome
Location

Chr.11:823546 on build GRCh38
Cytoband
11p15.5
Assay ID Hs02282520_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57104

Gene Name:

 patatin like phospholipase domain containing 2

Gene Aliases:

 1110001C14Rik, ATGL, FP17548, PEDF-R, TTS-2.2, TTS2, iPLA2zeta

Location:

 Chr.11:818895-825573 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PNPLA2 NM_020376.3 NP_065109.1
XM_006718265.3 XP_006718328.1
XM_006718266.3 XP_006718329.1
XM_017018028.1 XP_016873517.1
AF055000.1 AAC09354.1
AJ278475.1 CAC01131.1
AJ278476.1 CAC01132.1
AL833707.1
AY203925.1 AAP34448.1
AY894804.1 AAW81962.1
BC011958.1 AAH11958.1
BC017280.2 AAH17280.1
HQ651812.1
JF279441.1
JF279442.1
KF601369.1
KF833264.1
KF833265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss RPLP2 SLC25A22 PNPLA2 CRACR2B LOC171391 POLR2L SNORA52 CD151 CEND1 PANO1 TSPAN4 PDDC1 PIDD1 CHID1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss RPLP2 LOC101927503 MIR6744 LOC101059906 SLC25A22 MIR210 MUC5AC IRF7 TALDO1 CRACR2B LOC171391 ANO9 DRD4 PHRF1 CD151 SCT PTDSS2 TSPAN4 EPS8L2 TOLLIP CHID1 TMEM80 SIGIRR MUC5B RNH1 MIR210HG MUC2 PKP3 HRAS AP2A2 PNPLA2 DEAF1 POLR2L SNORA52 RASSF7 LRRC56 LOC143666 CEND1 LMNTD2 B4GALNT4 PANO1 MUC6 PDDC1 CDHR5 PIDD1
dgv1526n54 Chr.11:812533 - 843713 on Build GRCh38 Gain RPLP2 CD151 PNPLA2 CRACR2B TSPAN4 POLR2L
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain RPLP2 SLC25A22 AP2A2 PNPLA2 CRACR2B LOC171391 POLR2L SNORA52 CD151 CEND1 PANO1 TSPAN4 PDDC1 PIDD1 CHID1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss RPLP2 LOC101927503 MIR6744 LOC101059906 SLC25A22 MIR210 MUC5AC IRF7 TALDO1 CRACR2B LOC171391 ANO9 DRD4 PHRF1 CD151 SCT PTDSS2 TSPAN4 EPS8L2 TOLLIP CHID1 TMEM80 SIGIRR MUC5B RNH1 MIR210HG MUC2 HRAS TOLLIP-AS1 AP2A2 PNPLA2 DEAF1 POLR2L SNORA52 RASSF7 LRRC56 LOC143666 CEND1 LMNTD2 PANO1 MUC6 PDDC1 CDHR5 PIDD1
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss RPLP2 AP2A2 CD151 PNPLA2 CRACR2B TSPAN4 POLR2L PIDD1 SNORA52 CHID1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion RPLP2 LOC101059906 SLC25A22 MIR210 IRF7 TALDO1 CRACR2B LOC171391 ANO9 DRD4 PHRF1 CD151 SCT PTDSS2 TSPAN4 EPS8L2 CHID1 TMEM80 SIGIRR RNH1 MIR210HG PKP3 HRAS AP2A2 PNPLA2 DEAF1 POLR2L SNORA52 RASSF7 LRRC56 LOC143666 CEND1 LMNTD2 B4GALNT4 PANO1 PDDC1 CDHR5 PIDD1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss RPLP2 SLC25A22 PNPLA2 CRACR2B LOC171391 POLR2L SNORA52 CD151 CEND1 PANO1 TSPAN4 PDDC1 PIDD1 CHID1
nsv8759 Chr.11:775539 - 835248 on Build GRCh38 Gain RPLP2 SLC25A22 CD151 PNPLA2 CEND1 CRACR2B PANO1 PDDC1 LOC171391 PIDD1 SNORA52
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion RPLP2 LOC101059906 SLC25A22 MIR210 IRF7 TALDO1 CRACR2B LOC171391 DRD4 PHRF1 CD151 SCT PTDSS2 TSPAN4 EPS8L2 CHID1 TMEM80 RNH1 MIR210HG HRAS PNPLA2 DEAF1 POLR2L SNORA52 RASSF7 LRRC56 LOC143666 CEND1 LMNTD2 PANO1 PDDC1 CDHR5 PIDD1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain CD151 PNPLA2 CRACR2B TSPAN4 POLR2L CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion RPLP2 SLC25A22 PNPLA2 TALDO1 CRACR2B LOC171391 POLR2L SNORA52 CD151 CEND1 PANO1 TSPAN4 PDDC1 PIDD1 CHID1

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