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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88806071 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02297964_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 NP_112190.2
AB053172.1 BAB61878.1
AF070552.1
AF321125.1 AAG45181.1
BC000137.2 AAH00137.2
BC008676.1 AAH08676.1
BC008860.2 AAH08860.2
BC009410.1 AAH09410.1
BC014202.2 AAH14202.2
BC021126.1
BC049205.1 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5313n54 Chr.16:88795879 - 88806103 on Build GRCh38 Loss CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain ACSF3 LOC107987238 LOC100289580 CDT1 LOC400558 CBFA2T3 ZNF778 SLC22A31 PIEZO1 TRAPPC2L CTU2 GALNS APRT LOC101927793 CDH15 LOC339059 MIR4722 LOC105371409 LOC100129697 LINC00304 PABPN1L
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss ACSF3 LOC107987238 CDT1 LOC400558 CBFA2T3 SLC22A31 TRAPPC2L GALNS APRT LOC101927793 CDH15 LOC105371409 LOC100129697 LINC00304 PABPN1L
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain SNAI3 APRT LOC107987238 LOC100289580 RNF166 CDT1 LOC339059 MIR4722 SNAI3-AS1 PIEZO1 CTU2 GALNS
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain ACSF3 LOC107987238 LOC100289580 CDT1 LOC400558 CBFA2T3 ZNF778 SLC22A31 ANKRD11 PIEZO1 TRAPPC2L LOC100287036 GALNS APRT LOC101927793 LOC105371414 CDH15 LOC339059 LOC105371409 LOC100129697 LINC00304 PABPN1L
nsv471117 Chr.16:88805821 - 88838392 on Build GRCh38 Gain APRT LOC107987238 CDT1 GALNS
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion APRT LOC101927793 LOC107987238 CDT1 CBFA2T3 LOC105371409 LOC100129697 TRAPPC2L GALNS PABPN1L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC101927817 SPG7 RPL13 TUBB3 SPIRE2 TRAPPC2L VPS9D1 LOC100287036 AFG3L1P LOC105371414 LOC339059 LOC100129697 DEF8 IL17C CDK10 VPS9D1-AS1 ACSF3 RNF166 CBFA2T3 ANKRD11 ZNF276 PIEZO1 MVD CTU2 DPEP1 FAM157C URAHP SNORD68 CENPBD1 LOC105371409 CHMP1A DBNDD1 TUBB8P7 GAS8 LOC107987238 ZNF778 SLC22A31 LOC107984817 GALNS LOC105371419 SNAI3 GAS8-AS1 APRT LOC101927793 CDH15 MIR4722 LINC00304 SNAI3-AS1 FANCA PABPN1L TCF25 LOC100289580 SPATA33 CDT1 LOC400558 CPNE7 SPATA2L PRDM7 CYBA MC1R
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss APRT LOC107987238 CDT1 PIEZO1 TRAPPC2L GALNS
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss APRT LOC101927793 LOC107987238 CDT1 CBFA2T3 LOC105371409 LOC100129697 PIEZO1 TRAPPC2L GALNS PABPN1L
dgv5319n54 Chr.16:88804814 - 88809520 on Build GRCh38 Loss APRT CDT1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain APRT LOC101927793 LOC107987238 CDT1 CBFA2T3 PIEZO1 TRAPPC2L GALNS PABPN1L
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1
dgv3065n100 Chr.16:88711587 - 88927172 on Build GRCh38 Gain LOC107987238 LOC100289580 CDT1 CBFA2T3 PIEZO1 TRAPPC2L CTU2 GALNS APRT LOC101927793 LOC339059 MIR4722 PABPN1L

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