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See other MED25 CNV Assays ›
Gene Symbol
MED25
Assay Reference Genome
Location

Chr.19:49819259 on build GRCh38
Cytoband
19q13.33
Assay ID Hs02304121_cn
Size
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 81857

Gene Name:

 mediator complex subunit 25

Gene Aliases:

 ACID1, ARC92, BVSYS, CMT2B2, P78, PTOV2, TCBAP0758

Location:

 Chr.19:49818279-49840384 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MED25 NM_030973.3 NP_112235.2
XM_011527353.1 XP_011525655.1
AF261072.1 AAM20739.1
AJ617479.1 CAE84581.1
AK055844.1
AK289460.1
AK298897.1
AK307330.1 3 321
AL136746.1 CAB66680.1
AY533507.1 AAS45401.1
BC065297.1 AAH65297.1
DC410997.1
EU392500.1
EU392501.1
EU392502.1
EU392503.1
EU392504.1
EU392505.1
EU392506.1
EU392507.1
EU392508.1
EU392509.1
EU392510.1
EU392511.1
EU392512.1
EU392513.1
EU392514.1
EU392515.1
EU392516.1
EU392517.1
EU392518.1
EU392519.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss FAM83E SNAR-A14 LOC105447645 PNKP SPHK2 RCN3 DBP KDELR1 PPFIA3 SYNGR4 SNAR-A2 PTOV1-AS2 KCNA7 RUVBL2 PLA2G4C ALDH16A1 LOC101059948 C19orf73 IZUMO1 SNAR-A11 MIR4749 PLEKHA4 RRAS RPL18 SIGLEC11 SNAR-A13 IL4I1 NTN5 SNORD33 SIGLEC16 CABP5 SNAR-B2 MIR4324 GRWD1 FLT3LG BSPH1 PRRG2 IRF3 FLJ26850 VRK3 TSKS ELSPBP1 FUT2 GRIN2D LOC100287477 SNAR-C2 ZNF114 CGB8 SNAR-A3 TULP2 DHDH PLA2G4C-AS1 CGB2 ZNF473 TBC1D17 SLC17A7 LHB RASIP1 SNAR-B1 NUCB1 DKKL1 PTH2 MIR5088 FUT1 SNAR-G2 LMTK3 CGB1 CYTH2 CGB5 SNAR-G1 SNORD35B NTF4 SNAR-A6 EMP3 TRPM4 NUP62 SULT2B1 CARD8 PTOV1 MIR4751 LOC105372430 CA11 FTL PTOV1-AS1 NOSIP FUZ SNAR-A10 MIR4750 NUCB1-AS1 MIR6798 MAMSTR SNORD34 PPP1R15A FCGRT SNAR-C5 SNRNP70 HRC SNAR-A4 BAX FGF21 SNAR-A1 SNAR-C3 BCL2L12 CGB3 CGB7 MIR6799 SLC6A16 CARD8-AS1 CCDC114 GFY SNORD35A PIH1D1 TMEM143 LIG1 MIR6800 BCAT2 C19orf68 KCNJ14 MIR150 SNAR-C4 MED25 LIN7B CCDC155 SNAR-A8 TEAD2 SPACA4 ADM5 PRR12 ATF5 SNORD32A GYS1 SCAF1 LOC101928295 AP2A1 SNAR-A12 HSD17B14 SNAR-A9 PRMT1 SEC1P CD37 SNAR-A5 RPL13A SNAR-D RPS11 SNAR-C1 CPT1C AKT1S1 SNAR-A7
nsv470150 Chr.19:49618821 - 49856789 on Build GRCh38 Gain RRAS SCAF1 MIR6800 PTOV1 MIR5088 AP2A1 PTOV1-AS1 IRF3 PRMT1 MED25 TSKS BCL2L12 FUZ MIR6799 CPT1C PTOV1-AS2 ADM5 PRR12 MIR4749
dgv53n68 Chr.19:49724393 - 49943224 on Build GRCh38 Loss MIR6800 PTOV1 MIR4751 AP2A1 PTOV1-AS1 PNKP IL4I1 MED25 TSKS FUZ MIR6799 MIR4750 PTOV1-AS2 AKT1S1 TBC1D17 ATF5 NUP62 MIR4749
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6800 PTOV1 MIR4751 PRRG2 PTOV1-AS1 IRF3 PNKP NOSIP MED25 TSKS FUZ MIR4750 PTOV1-AS2 ADM5 PRR12 TBC1D17 ATF5 MIR4749 RRAS SCAF1 MIR5088 AP2A1 IL4I1 PRMT1 BCL2L12 MIR6799 CPT1C AKT1S1 NUP62
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR6800 PRRG2 PTOV1-AS1 IRF3 NOSIP MIR150 RCN3 MED25 TSKS FUZ ADM5 PRR12 SNORD32A SNORD34 RRAS SCAF1 FCGRT MIR5088 AP2A1 PRMT1 BCL2L12 SNORD33 RPL13A RPS11 MIR6799 SNORD35B CPT1C SNORD35A

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More Information


Additional Information:

For this assay, SNP(s) [rs74863643] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Function(s) Process(es)


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