Genomic Map
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Target Gene Details
Entrez Gene ID: | 39 |
Gene Name: | acetyl-CoA acetyltransferase 2 |
Gene Aliases: |
- |
Location: |
Chr.6:159761957-159779112 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ACAT2 | NM_001303253.1 | NP_001290182.1 | ||
| NM_005891.2 | NP_005882.2 | |||
| AB208993.1 | BAD92230.1 | |||
| AF356877.1 | AAM00223.1 | |||
| AK055001.1 | ||||
| AK225089.1 | ||||
| AK225244.1 | ||||
| AK291080.1 | ||||
| AK294273.1 | ||||
| BC000408.2 | AAH00408.1 | |||
| S70154.1 | AAB30856.1 |
Target Gene Details
Entrez Gene ID: | 6950 |
Gene Name: | t-complex 1 |
Gene Aliases: |
CCT-alpha, CCT1, CCTa, D6S230E, TCP-1-alpha |
Location: |
Chr.6:159778498-159789703 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TCP1 | NM_001008897.1 | NP_001008897.1 | ||
| NM_030752.2 | NP_110379.2 | |||
| AA810047.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv5563 | Chr.6:159775783 - 159788607 on Build GRCh38 | Insertion |
 SNORA29
SNORA20
ACAT2
TCP1
|
| esv2759483 | Chr.6:159582799 - 159794119 on Build GRCh38 | Gain |
SNORA29
LOC401281
SOD2
MRPL18
SNORA20
ACAT2
LOC100129518
WTAP
TCP1
|
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Additional Information:
For this assay, SNP(s) [rs73585630] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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