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See other RGS11 CNV Assays ›
Gene Symbol
RGS11
Assay Reference Genome
Location

Chr.16:275311 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02360412_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8786

Gene Name:

 regulator of G-protein signaling 11

Gene Aliases:

 RS11

Location:

 Chr.16:268301-275943 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RGS11 NM_001286485.1 NP_001273414.1
NM_001286486.1 NP_001273415.1
NM_003834.2 NP_003825.1
NM_183337.2 NP_899180.1
XM_011522719.2 XP_011521021.1
XM_011522720.2 XP_011521022.1
XM_011522721.1 XP_011521023.1
XM_011522722.1 XP_011521024.1
XM_011522723.1 XP_011521025.1
AB016929.1 BAA74751.1
AF035153.1 AAC69175.1
AF035154.1 AAC69176.1
AK091701.1
AK293564.1
AK294033.1
AK294448.1
AK308972.1
BC040504.1 AAH40504.1
BC141803.1
DC423811.1 2 285

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MLST8 C1QTNF8 MIR5587 RAB40C ECI1 ABCA17P CCDC154 LOC105371038 TPSD1 LOC729652 METTL26 ERVK13-1 PIGQ NPRL3 GNPTG JMJD8 HS3ST6 PTX4 C16orf91 UBE2I SNORA10 SNORA64 POLR3K MIR3180-5 RGS11 AXIN1 MIR6767 GFER MRPS34 RNF151 NOXO1 PDPK1 PRR25 TPSAB1 CHTF18 MIR6768 NME4 RHBDF1 TPSG1 HAGH IFT140 LOC105371046 PDIA2 SSTR5-AS1 MPG RHBDL1 MEIOB LINC00235 SNORA78 DECR2 WFIKKN1 TELO2 LMF1 SPSB3 E4F1 LINC00254 UNKL SNHG9 SNHG19 MSLN SNRNP25 DDX11L10 HBA2 TPSB2 NUBP2 LOC107987233 CCNF MSRB1 EME2 CAPN15 HBZ KCTD5 TSR3 LOC105371045 RPL3L CRAMP1 TMEM204 MRPL28 ARHGDIG BAIAP3 MIR662 GNG13 MIR4717 LOC106660606 RPS2 WDR24 TBL3 HAGHL FBXL16 NME3 WDR90 RPL23AP5 CASKIN1 WASIR2 LOC101929280 LOC105371049 CLCN7 LUC7L SYNGR3 BRICD5 LOC105371047 HBM NHLRC4 MIR940 MIR3178 RNPS1 FAM173A C16orf59 TBC1D24 HBA1 PRSS27 FAHD1 IGFALS RPUSD1 TMEM8A MCRIP2 MIR1225 NDUFB10 TRAF7 RAB11FIP3 MIR3677 SSTR5 CACNA1H MIR6511B1 NARFL LOC652276 PRSS29P RAB26 CCDC78 HBQ1 PKD1 DNASE1L2 TSC2 STUB1 RHOT2 MAPK8IP3 AMDHD2 MIR4516 LOC107984876 LOC100134368 METRN ZNF598 ATP6V0C MIR6859-4 SLC9A3R2 SNORD60 NPW PGP MIR3176 CEMP1 MIR3177 NTHL1 HN1L LOC100287175 ABCA3 SOX8 FLJ42627 PRR35 NTN3 FAM234A LMF1-AS1 LOC105371184
esv3570031 Chr.16:243389 - 278107 on Build GRCh38 Gain RGS11 FAM234A
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain RGS11 AXIN1 RAB11FIP3 ARHGDIG NME4 LOC100134368 RPL23AP5 TMEM8A PDIA2 FAM234A MRPL28 DECR2
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion RGS11 AXIN1 ARHGDIG PDIA2
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain RGS11 AXIN1 ARHGDIG PDIA2 FAM234A
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss RGS11 AXIN1 ARHGDIG PDIA2
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss RGS11 AXIN1 RAB11FIP3 ARHGDIG NME4 LOC100134368 RPL23AP5 TMEM8A PDIA2 FAM234A MRPL28 DECR2

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More Information


Additional Information:

For this assay, SNP(s) [rs117215141] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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