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See other SLC38A3 CNV Assays ›
Gene Symbol
SLC38A3
Assay Reference Genome
Location

Chr.3:50217432 on build GRCh38
Cytoband
3p21.31
Assay ID Hs02367553_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10991

Gene Name:

 solute carrier family 38 member 3

Gene Aliases:

 G17, NAT1, SN1, SNAT3

Location:

 Chr.3:50205246-50220979 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC38A3 NM_006841.5 NP_006832.1
XM_006712954.2 XP_006713017.1
AF244548.1 AAG15313.1
AK293801.1
AK299677.1
AK313461.1
BC042875.1 AAH42875.1
BX537382.1 CAD97624.1
CR456970.1 CAG33251.1
U49082.1 AAB47236.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759148 Chr.3:50161045 - 50333946 on Build GRCh38 Loss LSMEM2 TUSC2 GNAT1 SEMA3F RASSF1 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 MIR566 GNAI2 HYAL2 HYAL3 MIR6872 NAT6 SEMA3B
nsv523560 Chr.3:50134964 - 50314769 on Build GRCh38 Loss LSMEM2 GNAT1 SEMA3F SEMA3F-AS1 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 MIR566 GNAI2 HYAL3 LOC107986035 MIR6872 NAT6 SEMA3B
dgv602n27 Chr.3:50140578 - 50287241 on Build GRCh38 Loss LSMEM2 GNAT1 MIR566 SEMA3F SEMA3F-AS1 GNAI2 LOC107986035 MIR6872 SEMA3B-AS1 SEMA3B MIR5787 SLC38A3
dgv8317n54 Chr.3:50206077 - 50383123 on Build GRCh38 Loss LSMEM2 TUSC2 RASSF1 ZMYND10 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 CACNA2D2 RASSF1-AS1 GNAI2 TMEM115 HYAL2 HYAL3 MIR6872 NAT6 SEMA3B CYB561D2 NPRL2
nsv834692 Chr.3:50161052 - 50356033 on Build GRCh38 Loss LSMEM2 TUSC2 GNAT1 SEMA3F RASSF1 ZMYND10 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 RASSF1-AS1 MIR566 GNAI2 TMEM115 HYAL2 HYAL3 MIR6872 NAT6 SEMA3B CYB561D2 NPRL2
dgv8316n54 Chr.3:50115923 - 50299991 on Build GRCh38 Loss LSMEM2 GNAT1 SEMA3F SEMA3F-AS1 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 RBM5 MIR566 GNAI2 HYAL3 LOC107986035 MIR6872 NAT6 SEMA3B
nsv515986 Chr.3:50066874 - 50254353 on Build GRCh38 Loss GNAT1 MIR566 SEMA3F SEMA3F-AS1 GNAI2 RBM6 LOC107986035 MIR5787 SLC38A3 RBM5-AS1 RBM5
nsv470561 Chr.3:50121341 - 50547568 on Build GRCh38 Loss LSMEM2 GNAT1 SEMA3F-AS1 ZMYND10 CACNA2D2 RASSF1-AS1 GNAI2 TMEM115 LOC107986035 NAT6 CYB561D2 NPRL2 TUSC2 SEMA3F RASSF1 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 MIR566 HYAL2 HYAL3 MIR6872 SEMA3B
nsv523662 Chr.3:50107518 - 50547568 on Build GRCh38 Loss LSMEM2 GNAT1 SEMA3F-AS1 ZMYND10 CACNA2D2 RBM5 RASSF1-AS1 GNAI2 TMEM115 LOC107986035 NAT6 CYB561D2 NPRL2 TUSC2 SEMA3F RASSF1 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 MIR566 HYAL2 HYAL3 MIR6872 SEMA3B
nsv834690 Chr.3:50064402 - 50263192 on Build GRCh38 Loss GNAT1 MIR566 SEMA3F SEMA3F-AS1 GNAI2 RBM6 LOC107986035 MIR5787 SLC38A3 RBM5-AS1 RBM5
nsv590255 Chr.3:50210391 - 50399396 on Build GRCh38 Loss LSMEM2 TUSC2 RASSF1 ZMYND10 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 CACNA2D2 RASSF1-AS1 GNAI2 TMEM115 HYAL2 HYAL3 MIR6872 NAT6 SEMA3B CYB561D2 NPRL2
nsv954855 Chr.3:50152468 - 50439169 on Build GRCh38 Deletion LSMEM2 GNAT1 SEMA3F-AS1 ZMYND10 CACNA2D2 RASSF1-AS1 GNAI2 TMEM115 LOC107986035 NAT6 CYB561D2 NPRL2 TUSC2 SEMA3F RASSF1 HYAL1 SEMA3B-AS1 MIR5787 SLC38A3 IFRD2 MIR566 HYAL2 HYAL3 MIR6872 SEMA3B

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