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See other ATP2C2 CNV Assays ›
Gene Symbol
ATP2C2
Assay Reference Genome
Location

Chr.16:84408496 on build GRCh38
Cytoband
16q24.1
Assay ID Hs02371713_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9914

Gene Name:

 ATPase secretory pathway Ca2+ transporting 2

Gene Aliases:

 SPCA2

Location:

 Chr.16:84368523-84465777 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2C2 NM_001286527.2 NP_001273456.2
NM_001291454.1 NP_001278383.1
NM_014861.3 NP_055676.3
XM_011523486.2 XP_011521788.1
AB014603.1 BAA31678.2
AK091051.1
AK300526.1
AK316128.1
AY791884.1 AAV54193.1
BX648333.1 CAI46049.1
CR749829.1 CAH18686.1
DB218862.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv1064677 Chr.16:84384525 - 84462657 on Build GRCh38 Loss ATP2C2 LOC105371374
nsv1060813 Chr.16:84406267 - 84430850 on Build GRCh38 Loss ATP2C2
dgv169n21 Chr.16:84346305 - 84480735 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss WFDC1 COTL1 TLDC1 ATP2C2 LOC105371374
nsv471107 Chr.16:84378250 - 84455427 on Build GRCh38 Gain ATP2C2
nsv457598 Chr.16:84367244 - 84435705 on Build GRCh38 Loss ATP2C2
nsv457599 Chr.16:84378422 - 84455324 on Build GRCh38 Gain ATP2C2
nsv1066356 Chr.16:84401623 - 84438300 on Build GRCh38 Loss ATP2C2
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LOC102724344 MTHFSD LOC440390 FOXC2 GSE1 FLJ30679 LOC105376777 LOC101928557 KCNG4 FAM92B ZDHHC7 KIAA0513 MIR5093 LOC400548 WFDC1 COTL1 COX4I1 LINC00311 C16orf74 LOC101928474 MIR1910 MIR6774 FENDRR LINC01081 FOXF1 FOXL1 CRISPLD2 FOXC2-AS1 DNAAF1 TLDC1 ATP2C2 TAF1C ADAD2 KLHL36 GINS2 USP10 LINC00917 LINC01082 LOC146513 EMC8 IRF8 LOC105371374 LOC101928614
dgv5263n54 Chr.16:84403617 - 84435705 on Build GRCh38 Loss ATP2C2
nsv523226 Chr.16:84397270 - 84455427 on Build GRCh38 Loss ATP2C2
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
dgv548e214 Chr.16:84253360 - 84417275 on Build GRCh38 Gain WFDC1 ATP2C2 LOC105376777
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss COTL1 TLDC1 ATP2C2 LOC105371374
nsv573430 Chr.16:84387654 - 84501190 on Build GRCh38 Loss TLDC1 ATP2C2 LOC105371374
nsv1056072 Chr.16:84397757 - 84451417 on Build GRCh38 Loss ATP2C2

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