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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:288051 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02398211_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 11 3049 NP_003493.1
NM_181050.2 10 2941 NP_851393.1
NR_134879.1 9 2844
XM_011522682.2 11 3075 XP_011520984.1
XM_011522683.2 10 2966 XP_011520985.1
XM_011522684.2 11 2925 XP_011520986.1
XM_011522686.1 10 1832 XP_011520988.1
XM_017023743.1 11 3060 XP_016879232.1
XM_017023744.1 10 2951 XP_016879233.1
XM_017023745.1 10 2100 XP_016879234.1
XM_017023746.1 10 2676 XP_016879235.1
AB208876.1 8 5730 BAD92113.1
AF009674.1 11 2775 AAC51624.1
BC017447.1 6 1251 AAH17447.1
BC044648.1 10 2713 AAH44648.1
BX648449.1 2 1177
KF615847.1 11 2020
KF615848.1 10 1912
KF615849.1 7 1536
KF615850.1 3 1465
KF615851.1 6 1868
KF615852.1 9 2844
KF615853.1 6 918
KF615854.1 6 765

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RGS11 HAGH HBA1 RAB26 ABCA17P SNHG9 PRR35 TMEM8A LOC105371045 SSTR5-AS1 NHLRC4 TELO2 LINC00254 RAB40C LOC100134368 PRSS27 DNASE1L2 MRPS34 GNG13 NARFL IFT140 MIR6767 MIR6768 LOC106660606 IGFALS PDIA2 MPG PIGQ ARHGDIG TBL3 LUC7L CASKIN1 UBE2I MRPL28 ECI1 NPW DDX11L10 LOC107987233 NUBP2 PTX4 LOC105371047 NME3 WFIKKN1 TPSG1 WASIR2 MIR3176 E4F1 LOC105371038 LOC105371046 HN1L CACNA1H SNORD60 NME4 SNORA64 RHBDF1 MIR662 MIR3177 MIR4516 MIR6859-4 MIR3180-5 RNPS1 KCTD5 CCDC78 BAIAP3 SLC9A3R2 MIR3677 GFER CLCN7 PRR25 TPSD1 BRICD5 NTN3 SNRNP25 HAGHL NTHL1 CCNF METTL26 C16orf91 TBC1D24 POLR3K MSLN ZNF598 TMEM204 CEMP1 FBXL16 FAM234A PKD1 RPS2 NOXO1 PGP C16orf59 JMJD8 SPSB3 NPRL3 MAPK8IP3 METRN ABCA3 RPUSD1 SOX8 RHBDL1 CCDC154 AMDHD2 LOC100287175 SSTR5 EME2 ERVK13-1 MIR6511B1 AXIN1 MIR4717 HBM CRAMP1 TPSB2 HS3ST6 LINC00235 SNHG19 GNPTG MIR3178 LMF1-AS1 MLST8 TPSAB1 PRSS29P SNORA10 TRAF7 FLJ42627 FAHD1 PDPK1 LOC105371184 MEIOB RNF151 HBQ1 DECR2 LOC729652 LOC105371049 LOC652276 RPL3L SYNGR3 UNKL MSRB1 HBZ LMF1 LOC107984876 C1QTNF8 HBA2 MCRIP2 FAM173A ATP6V0C MIR940 WDR24 RAB11FIP3 WDR90 CHTF18 TSR3 LOC101929280 SNORA78 CAPN15 TSC2 STUB1 RHOT2 RPL23AP5 MIR5587 NDUFB10 MIR1225
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain RGS11 PDIA2 LOC100134368 ARHGDIG TMEM8A AXIN1 FAM234A RPL23AP5 NME4 RAB11FIP3 DECR2 MRPL28
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion RGS11 PDIA2 ARHGDIG AXIN1
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain AXIN1 MRPL28
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss PDIA2 ARHGDIG AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain RGS11 PDIA2 ARHGDIG AXIN1 FAM234A
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss RGS11 PDIA2 ARHGDIG AXIN1
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss RGS11 PDIA2 LOC100134368 ARHGDIG TMEM8A AXIN1 FAM234A RPL23AP5 NME4 RAB11FIP3 DECR2 MRPL28

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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