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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:288051 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02398211_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 11 3049 NP_003493.1
NM_181050.2 10 2941 NP_851393.1
NR_134879.1 9 2844
XM_011522682.2 11 3075 XP_011520984.1
XM_011522683.2 10 2966 XP_011520985.1
XM_011522684.2 11 2925 XP_011520986.1
XM_011522686.1 10 1832 XP_011520988.1
XM_017023743.1 11 3060 XP_016879232.1
XM_017023744.1 10 2951 XP_016879233.1
XM_017023745.1 10 2100 XP_016879234.1
XM_017023746.1 10 2676 XP_016879235.1
AB208876.1 8 5730 BAD92113.1
AF009674.1 11 2775 AAC51624.1
BC017447.1 6 1251 AAH17447.1
BC044648.1 10 2713 AAH44648.1
BX648449.1 2 1177
KF615847.1 11 2020
KF615848.1 10 1912
KF615849.1 7 1536
KF615850.1 3 1465
KF615851.1 6 1868
KF615852.1 9 2844
KF615853.1 6 918
KF615854.1 6 765

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNORA10 TMEM204 SPSB3 LOC100134368 TMEM8A FAHD1 EME2 MLST8 SNRNP25 LOC100287175 RAB26 LOC105371038 MIR4717 CCDC154 ARHGDIG ERVK13-1 MIR1225 MRPS34 STUB1 LMF1 WDR24 IGFALS MIR6511B1 MSLN LOC101929280 RHBDL1 NTHL1 SNHG9 SNORA64 TSR3 MSRB1 CAPN15 MIR3176 PRSS29P JMJD8 MIR6767 RHBDF1 WASIR2 SOX8 MIR3177 PRR25 HBM ECI1 DDX11L10 RPL3L RNPS1 LOC105371046 LOC105371045 LOC106660606 HAGH CACNA1H NME3 BAIAP3 ABCA3 SNHG19 POLR3K RAB11FIP3 CASKIN1 LUC7L PRR35 TELO2 SLC9A3R2 NUBP2 AXIN1 LINC00235 CRAMP1 KCTD5 SSTR5 C16orf91 NOXO1 MIR3180-5 ABCA17P DNASE1L2 LOC105371049 LOC652276 RNF151 ZNF598 LOC107987233 FBXL16 TSC2 HBQ1 NPRL3 HBA2 SNORD60 LOC105371047 PGP RGS11 NHLRC4 MEIOB RPL23AP5 LOC729652 MIR5587 METTL26 MPG GNPTG TRAF7 SNORA78 MAPK8IP3 DECR2 WDR90 NME4 TPSB2 NPW MRPL28 NARFL LMF1-AS1 HS3ST6 MIR662 CLCN7 CEMP1 LINC00254 CHTF18 AMDHD2 WFIKKN1 C16orf59 BRICD5 METRN PDPK1 LOC105371184 HBA1 PTX4 LOC107984876 TPSD1 GNG13 NDUFB10 SYNGR3 PKD1 MIR6859-4 RPS2 MIR4516 PRSS27 CCNF FAM173A MIR6768 FLJ42627 UBE2I NTN3 RPUSD1 E4F1 C1QTNF8 ATP6V0C MIR3178 CCDC78 RHOT2 RAB40C TBC1D24 UNKL MIR940 TPSAB1 MCRIP2 MIR3677 PIGQ HBZ HN1L GFER FAM234A SSTR5-AS1 PDIA2 TPSG1 HAGHL TBL3 IFT140
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain MRPL28 AXIN1
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion RGS11 ARHGDIG PDIA2 AXIN1
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain RGS11 ARHGDIG LOC100134368 FAM234A TMEM8A DECR2 RAB11FIP3 NME4 PDIA2 RPL23AP5 MRPL28 AXIN1
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG PDIA2 AXIN1
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain RGS11 ARHGDIG FAM234A PDIA2 AXIN1
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss RGS11 ARHGDIG PDIA2 AXIN1
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss RGS11 ARHGDIG LOC100134368 FAM234A TMEM8A DECR2 RAB11FIP3 NME4 PDIA2 RPL23AP5 MRPL28 AXIN1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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