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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2044774 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02400765_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
HY057336.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ATP6V0C LUC7L MIR3180-5 TMEM8A MPG CCNF CHTF18 PIGQ LMF1 RNF151 LOC100287175 MIR3176 EME2 MIR4717 C16orf91 ERVK13-1 NTN3 LOC105371038 NTHL1 POLR3K FBXL16 LOC100134368 LOC101929280 UBE2I PRSS29P TMEM204 TBL3 HBQ1 NDUFB10 MIR6859-4 HAGH MIR3178 METRN ECI1 LOC105371047 LOC105371049 AMDHD2 IGFALS PGP ZNF598 NHLRC4 SNRNP25 RHOT2 SSTR5-AS1 GFER MIR940 AXIN1 STUB1 RHBDF1 LOC107987233 RAB26 PDIA2 RPL3L LINC00254 RNPS1 GNG13 SNORD60 MIR3177 RHBDL1 RAB11FIP3 MIR6768 RPUSD1 TBC1D24 MIR6511B1 NME3 NARFL CEMP1 HBM LINC00235 SNHG9 MLST8 MIR662 DDX11L10 SYNGR3 TPSG1 LOC105371184 WDR24 TPSAB1 C16orf59 RGS11 MRPL28 WASIR2 KCTD5 HBZ NPRL3 WDR90 TSR3 METTL26 LOC105371045 MAPK8IP3 CLCN7 SNORA10 HN1L SLC9A3R2 CCDC154 LOC107984876 SSTR5 CASKIN1 HS3ST6 LOC105371046 MIR5587 WFIKKN1 ARHGDIG IFT140 HAGHL E4F1 BAIAP3 SPSB3 TSC2 FAM173A NUBP2 TPSD1 CRAMP1 ABCA17P MRPS34 MCRIP2 BRICD5 LOC106660606 SNHG19 PKD1 TELO2 C1QTNF8 GNPTG PRR35 MEIOB PDPK1 RPS2 PRR25 FAHD1 MIR1225 MIR6767 CAPN15 RPL23AP5 SNORA64 MIR4516 PTX4 SNORA78 JMJD8 DECR2 NME4 MIR3677 PRSS27 TRAF7 HBA1 LOC729652 CACNA1H LMF1-AS1 UNKL SOX8 RAB40C LOC652276 MSRB1 NPW NOXO1 CCDC78 DNASE1L2 FLJ42627 ABCA3 MSLN TPSB2 HBA2 FAM234A
nsv523037 Chr.16:1971892 - 2083900 on Build GRCh38 Loss GFER NTHL1 SYNGR3 SLC9A3R2 TBL3 ZNF598 TSC2 NPW NOXO1
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR1225 GFER NTHL1 MIR6511B1 SNORA64 SNORA10 MIR4516 SNORA78 SNHG9 SLC9A3R2 TBL3 RPL3L NDUFB10 RNF151 MSRB1 NPW NOXO1 HS3ST6 PKD1 SYNGR3 LOC105371049 RPS2 ZNF598 TSC2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion MIR1225 GFER NTHL1 MIR6511B1 SNORA64 SNORA10 SNORA78 SNHG9 SLC9A3R2 TBL3 NDUFB10 RNF151 NPW NOXO1 PKD1 SYNGR3 LOC105371049 RPS2 ZNF598 TSC2

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