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See other NTHL1 CNV Assays ›
Gene Symbol
NTHL1
Assay Reference Genome
Location

Chr.16:2044774 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02400765_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 4913

Gene Name:

 nth-like DNA glycosylase 1

Gene Aliases:

 FAP3, NTH1, OCTS3, hNTH1

Location:

 Chr.16:2039815-2047872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NTHL1 NM_001318193.1 NP_001305122.1
NM_001318194.1 NP_001305123.1
NM_002528.6 NP_002519.1
XM_017023253.1 XP_016878742.1
AB001575.1 BAA19413.1
BC000391.2 AAH00391.2
BC003014.1 AAH03014.1
BE900738.1
BG468617.1
HY057336.1
U79718.1 AAB41534.1
U81285.1 AAC51136.1
Y09687.1 CAA70865.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC105371049 HN1L MIR3677 CCDC154 CRAMP1 SOX8 C16orf59 SNRNP25 MSLN SYNGR3 HBA1 FAHD1 TBL3 LOC100287175 MIR4717 TSR3 BRICD5 MIR3178 NPW WFIKKN1 STUB1 NTHL1 HBA2 CEMP1 NHLRC4 MIR1225 TPSAB1 SNHG19 JMJD8 LUC7L DDX11L10 GNPTG IFT140 NME3 GNG13 WASIR2 TPSB2 MPG PKD1 PDPK1 MEIOB TBC1D24 SNHG9 FAM173A NUBP2 CAPN15 IGFALS LOC105371038 PIGQ PRR35 MSRB1 SLC9A3R2 KCTD5 RAB26 LINC00254 CHTF18 LOC101929280 NPRL3 ECI1 FBXL16 LMF1-AS1 ERVK13-1 TPSD1 HAGH SSTR5-AS1 NOXO1 TSC2 ARHGDIG AXIN1 LMF1 MIR940 E4F1 RHBDF1 WDR24 RAB11FIP3 HBM LOC107987233 PGP LOC105371046 NARFL CACNA1H ATP6V0C LOC105371045 MIR6511B1 LOC652276 RAB40C FLJ42627 RGS11 ZNF598 SNORA78 RNF151 LOC106660606 LOC100134368 RHBDL1 MIR5587 RHOT2 LOC105371184 DNASE1L2 C1QTNF8 C16orf91 AMDHD2 NTN3 RPL23AP5 SSTR5 CCDC78 RPUSD1 MAPK8IP3 MIR3180-5 UBE2I DECR2 CCNF PTX4 RNPS1 MRPL28 PRSS27 MIR4516 LOC729652 LINC00235 NDUFB10 CLCN7 NME4 UNKL PRSS29P HBQ1 GFER METRN MCRIP2 MIR6767 PRR25 TMEM8A SNORA64 MIR662 TRAF7 TELO2 MIR6859-4 SNORA10 METTL26 LOC107984876 SNORD60 RPS2 RPL3L HBZ HS3ST6 BAIAP3 POLR3K ABCA17P MIR6768 TPSG1 CASKIN1 MIR3176 FAM234A MIR3177 PDIA2 ABCA3 EME2 MLST8 WDR90 SPSB3 LOC105371047 TMEM204 MRPS34 HAGHL
nsv471072 Chr.16:1971892 - 2317508 on Build GRCh38 Loss LOC105371049 MIR3677 SYNGR3 GFER TBL3 MIR6511B1 SLC9A3R2 RAB26 MIR4717 BRICD5 ZNF598 TRAF7 NPW LOC106660606 NTHL1 SNORD60 ECI1 MIR1225 DNASE1L2 SNHG19 CASKIN1 NOXO1 TSC2 MIR940 ABCA3 MLST8 E4F1 PKD1 MIR3180-5 PGP RNPS1 MIR4516
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion LOC105371049 RPS2 RPL3L NDUFB10 HS3ST6 MIR1225 SYNGR3 GFER TBL3 MIR6511B1 MSRB1 NOXO1 SLC9A3R2 TSC2 SNORA64 ZNF598 PKD1 NPW SNORA78 SNORA10 RNF151 SNHG9 MIR4516 NTHL1
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion LOC105371049 RPS2 NDUFB10 MIR1225 SYNGR3 GFER TBL3 MIR6511B1 NOXO1 SLC9A3R2 TSC2 SNORA64 ZNF598 PKD1 NPW SNORA78 SNORA10 RNF151 SNHG9 NTHL1

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