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See other AXIN1 CNV Assays ›
Gene Symbol
AXIN1
Assay Reference Genome
Location

Chr.16:288265 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02402105_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8312

Gene Name:

 axin 1

Gene Aliases:

 AXIN, PPP1R49

Location:

 Chr.16:287440-355226 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AXIN1 NM_003502.3 NP_003493.1
NM_181050.2 NP_851393.1
NR_134879.1
XM_011522682.2 XP_011520984.1
XM_011522683.2 XP_011520985.1
XM_011522684.2 XP_011520986.1
XM_011522686.1 XP_011520988.1
XM_017023743.1 XP_016879232.1
XM_017023744.1 XP_016879233.1
XM_017023745.1 XP_016879234.1
XM_017023746.1 XP_016879235.1
AB208876.1 BAD92113.1
AF009674.1 AAC51624.1
BC017447.1 AAH17447.1
BC044648.1 AAH44648.1
BX648449.1
KF615847.1
KF615848.1
KF615849.1
KF615850.1
KF615851.1
KF615852.1
KF615853.1
KF615854.1
KU178413.1
KU178414.1
KU178415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RPL3L RNF151 MIR6511B1 PRR35 LOC100287175 CASKIN1 NME4 NTHL1 E4F1 ECI1 WASIR2 DDX11L10 NPRL3 MIR6859-4 EME2 TELO2 RHOT2 LOC100134368 LOC105371045 LOC105371184 CCDC154 GNPTG LOC105371049 FAM173A C1QTNF8 ZNF598 HBA1 DECR2 TRAF7 SYNGR3 NHLRC4 MIR5587 LOC107984876 SNHG9 LMF1 KCTD5 RNPS1 PDPK1 TMEM8A NUBP2 CCDC78 PDIA2 CACNA1H METRN PRR25 LOC729652 SLC9A3R2 HAGH TPSB2 MPG RPS2 MSLN LOC105371046 LINC00235 CEMP1 RHBDL1 GFER PGP LUC7L HBA2 TPSAB1 LOC105371038 LOC105371047 UBE2I CHTF18 SNHG19 CAPN15 CRAMP1 MSRB1 RGS11 RHBDF1 NME3 LINC00254 MCRIP2 CCNF IFT140 FAM234A SSTR5 PRSS27 MIR940 STUB1 FAHD1 POLR3K NOXO1 FBXL16 MIR4516 TMEM204 HBZ TBC1D24 IGFALS LOC101929280 NTN3 BAIAP3 LOC106660606 TSR3 WFIKKN1 GNG13 CLCN7 JMJD8 MIR3178 NDUFB10 ERVK13-1 SPSB3 LMF1-AS1 MRPS34 TPSD1 C16orf91 MIR6768 MRPL28 MIR6767 SNORD60 DNASE1L2 HN1L NPW MIR3177 WDR90 LOC652276 ARHGDIG SNORA10 TSC2 BRICD5 HBM TBL3 HS3ST6 FLJ42627 SNORA64 MEIOB RAB11FIP3 SOX8 C16orf59 METTL26 AXIN1 RAB40C MIR3180-5 MLST8 SSTR5-AS1 SNORA78 MIR4717 PTX4 WDR24 MIR1225 MIR662 PKD1 NARFL SNRNP25 MIR3677 AMDHD2 ABCA3 PIGQ RAB26 TPSG1 MAPK8IP3 ABCA17P PRSS29P ATP6V0C RPL23AP5 MIR3176 UNKL LOC107987233 HBQ1 HAGHL RPUSD1
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain RGS11 LOC100134368 RAB11FIP3 RPL23AP5 ARHGDIG AXIN1 TMEM8A DECR2 MRPL28 FAM234A PDIA2 NME4
nsv952896 Chr.16:273501 - 321500 on Build GRCh38 Deletion RGS11 ARHGDIG AXIN1 PDIA2
esv3637564 Chr.16:287941 - 370218 on Build GRCh38 Gain AXIN1 MRPL28
nsv570951 Chr.16:279671 - 322597 on Build GRCh38 Loss ARHGDIG AXIN1 PDIA2
nsv827477 Chr.16:262247 - 297639 on Build GRCh38 Gain RGS11 ARHGDIG AXIN1 FAM234A PDIA2
nsv570947 Chr.16:272935 - 297326 on Build GRCh38 Loss RGS11 ARHGDIG AXIN1 PDIA2
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss RGS11 LOC100134368 RAB11FIP3 RPL23AP5 ARHGDIG AXIN1 TMEM8A DECR2 MRPL28 FAM234A PDIA2 NME4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)


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