Hs02405351_cn

• Gene Symbol: CLDN20
• Assay Reference Genome Location: Chr.6:155276311 on build GRCh38
• Cytoband: 6q25.3

Target Gene Details

• Entrez Gene ID: 49861
• Gene Name: claudin 20
• Gene Aliases: -
• Location: Chr.6:155264013-155276548 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLDN20	NM_001001346.3	2	972	NP_001001346.1
	XM_011535848.2	2	780	XP_011534150.1
	BC020838.1	2	973	AAH20838.1

Target Gene Details

• Entrez Gene ID: 51106
• Gene Name: transcription factor B1, mitochondrial
• Gene Aliases: CGI-75, CGI75, mtTFB, mtTFB1
• Location: Chr.6:155229990-155314497 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TFB1M	NM_016020.3			NP_057104.2
	XM_005267006.4			XP_005267063.1
	XM_011535870.1			XP_011534172.1
	XM_011535871.1			XP_011534173.1
	XM_011535872.2			XP_011534174.1
	XM_011535873.2			XP_011534175.1
	XM_017010917.1			XP_016866406.1
	AF151833.1			AAD34070.1
	AK289484.1
	BC005183.1
	BC017788.1			AAH17788.1
	BU849912.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1025003	Chr.6:155077125 - 155755140 on Build GRCh38	Gain	CLDN20 TFB1M LOC105378068 NOX3 TIAM2

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

tight junction, RNA methyltransferase

Gene Ontology Categories:

Process(es)

calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
transcription, DNA-templated
regulation of transcription, DNA-templated
mitochondrion organization
rRNA methylation

Function(s)

structural molecule activity
identical protein binding
rRNA (adenine-N6,N6-)-dimethyltransferase activity
DNA binding
protein binding
poly(A) RNA binding