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See other AATK-AS1 CNV Assays ›
Gene Symbol
AATK-AS1
Assay Reference Genome
Location

Chr.17:81181558 on build GRCh38
Cytoband
17q25.3
Assay ID Hs02407518_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 388428

Gene Name:

 AATK antisense RNA 1

Gene Aliases:

 -

Location:

 Chr.17:81165507-81183164 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AATK-AS1 NR_027255.1
AK126811.1 BAC86704.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv828128 Chr.17:80659041 - 81736487 on Build GRCh38 Loss CCDC137 LOC105371925 CHMP6 AATK BAIAP2-AS1 MRPL12 LOC400627 TEPSIN OXLD1 MIR657 FAAP100 LOC107985021 ACTG1 MIR4740 MIR3186 MIR3065 TMEM105 BAHCC1 MIR338 HGS CEP131 LOC105371921 LOC101928855 LINC00482 AATK-AS1 LOC100129503 BAIAP2 FSCN2 SLC38A10 LOC100130370 MIR6786 SLC25A10 MIR1250 C17orf89 ARL16 PDE6G RPTOR TSPAN10 NPLOC4 LOC107985022
nsv1057306 Chr.17:81154954 - 81207813 on Build GRCh38 Loss AATK-AS1 AATK CEP131
esv2758707 Chr.17:81152631 - 81345362 on Build GRCh38 Gain AATK-AS1 TMEM105 SLC38A10 LOC105371925 AATK C17orf89 CEP131 TEPSIN LINC00482
dgv46n68 Chr.17:81133921 - 81288932 on Build GRCh38 Loss AATK-AS1 SLC38A10 LOC105371925 AATK C17orf89 CEP131 TEPSIN
nsv1065052 Chr.17:81080876 - 81204920 on Build GRCh38 Gain AATK-AS1 MIR3065 MIR338 MIR657 BAIAP2 AATK MIR1250 CEP131
nsv470619 Chr.17:81032233 - 81349843 on Build GRCh38 Loss MIR3065 TMEM105 MIR338 LOC105371925 AATK BAIAP2-AS1 CEP131 TEPSIN LINC00482 AATK-AS1 MIR657 BAIAP2 SLC38A10 MIR1250 C17orf89
dgv3292n100 Chr.17:81019582 - 81204920 on Build GRCh38 Gain AATK-AS1 MIR3065 MIR338 MIR657 BAIAP2 AATK MIR1250 BAIAP2-AS1 CEP131
nsv952389 Chr.17:81137501 - 81593774 on Build GRCh38 Deletion TMEM105 BAHCC1 LOC105371925 AATK CEP131 TEPSIN LINC00482 AATK-AS1 FSCN2 SLC38A10 LOC100130370 C17orf89 FAAP100 ACTG1 MIR4740 NPLOC4 MIR3186
nsv1064123 Chr.17:81168449 - 81282457 on Build GRCh38 Gain AATK-AS1 SLC38A10 LOC105371925 C17orf89 CEP131 TEPSIN

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More Information


Additional Information:

For this assay, SNP(s) [rs113860147,rs76435140] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

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