Hs02487767_cn

• Gene Symbol: GDE1
• Assay Reference Genome Location: Chr.16:19510886 on build GRCh38
• Cytoband: 16p12.3

Target Gene Details

• Entrez Gene ID: 51573
• Gene Name: glycerophosphodiester phosphodiesterase 1
• Gene Aliases: 363E6.2, MIR16
• Location: Chr.16:19501693-19522145 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GDE1	NM_001324066.1	3	673	NP_001310995.1
	NM_001324067.1	3	677	NP_001310996.1
	NM_016641.3	3	660	NP_057725.1
	NR_136689.1	3	677
	AF212862.1	3	616	AAF65234.1
	AF306698.1	3	569
	AK312912.1	3	630
	AY463154.1	3	496	AAR25624.1
	BC014981.1	3	551	AAH14981.1
	BC025273.1	3	611	AAH25273.1
	BQ897064.1	3	660

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833163	Chr.16:19457512 - 19628716 on Build GRCh38	Gain	TMC5 CCP110 C16orf62 GDE1
nsv571582	Chr.16:19038056 - 19790801 on Build GRCh38	Gain	IQCK LOC102723385 SYT17 ITPRIPL2 CLEC19A TMC5 COQ7 CCP110 C16orf62 GDE1 TMC7 KNOP1
nsv436835	Chr.16:18930652 - 21500976 on Build GRCh38	Insertion	SMG1P3 PDILT ITPRIPL2 DCUN1D3 ANKS4B COQ7 GPR139 GP2 LOC81691 ACSM1 LOC102723385 CRYM-AS1 CRYM CLEC19A ERI2 DNAH3 CCP110 SNX29P1 LOC100190986 THUMPD1 ACSM5 GDE1 ACSM3 GPRC5B ACSM2A ACSM2B LYRM1 UMOD TMEM159 C16orf62 TMC7 IQCK ZP2 SYT17 TMC5 NPIPB3 KNOP1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

lipid metabolic process
glycerophospholipid catabolic process

Function(s)

glycerophosphodiester phosphodiesterase activity
metal ion binding
glycerophosphoinositol glycerophosphodiesterase activity