Hs02487767_cn

• Gene Symbol: GDE1
• Assay Reference Genome Location: Chr.16:19510886 on build GRCh38
• Cytoband: 16p12.3

Target Gene Details

• Entrez Gene ID: 51573
• Gene Name: glycerophosphodiester phosphodiesterase 1
• Gene Aliases: 363E6.2, MIR16
• Location: Chr.16:19501693-19522145 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GDE1	NM_001324066.1	3	673	NP_001310995.1
	NM_001324067.1	3	677	NP_001310996.1
	NM_016641.3	3	660	NP_057725.1
	NR_136689.1	3	677
	AF212862.1	3	616	AAF65234.1
	AF306698.1	3	569
	AK312912.1	3	630
	AY463154.1	3	496	AAR25624.1
	BC014981.1	3	551	AAH14981.1
	BC025273.1	3	611	AAH25273.1
	BQ897064.1	3	660

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833163	Chr.16:19457512 - 19628716 on Build GRCh38	Gain	TMC5 C16orf62 CCP110 GDE1
nsv571582	Chr.16:19038056 - 19790801 on Build GRCh38	Gain	LOC102723385 TMC5 IQCK C16orf62 CCP110 SYT17 TMC7 GDE1 ITPRIPL2 KNOP1 COQ7 CLEC19A
nsv436835	Chr.16:18930652 - 21500976 on Build GRCh38	Insertion	LOC102723385 GP2 DCUN1D3 LOC81691 THUMPD1 GDE1 ANKS4B ACSM2A COQ7 GPRC5B NPIPB3 ACSM1 TMC5 LOC100190986 ACSM3 DNAH3 SMG1P3 CRYM KNOP1 ERI2 SNX29P1 UMOD C16orf62 SYT17 TMC7 ITPRIPL2 ACSM5 PDILT TMEM159 LYRM1 IQCK GPR139 ACSM2B ZP2 CCP110 CRYM-AS1 CLEC19A

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Process(es)

lipid metabolic process
glycerophospholipid catabolic process

Function(s)

glycerophosphodiester phosphodiesterase activity
metal ion binding
glycerophosphoinositol glycerophosphodiesterase activity