Hs02488127_cn

• Gene Symbol: CCL16
• Assay Reference Genome Location: Chr.17:35981413 on build GRCh38
• Cytoband: 17q12

Target Gene Details

• Entrez Gene ID: 6360
• Gene Name: C-C motif chemokine ligand 16
• Gene Aliases: CKb12, HCC-4, ILINCK, LCC-1, LEC, LMC, Mtn-1, NCC-4, NCC4, SCYA16, SCYL4
• Location: Chr.17:35976493-35983620 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCL16	NM_004590.3	1	84	NP_004581.1
	XM_005258020.4	3	366	XP_005258077.1
	AB007454.1	1	84	BAA24057.1
	AF039955.1	1	75	AAC97451.1
	AF055467.1			AAC28844.1
	BC099662.3	1	49	AAH99662.1
	U91746.1			AAC05587.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1059795	Chr.17:35828724 - 36157706 on Build GRCh38	Gain	LOC101927339 CCL16 CCL18 CCL3 CCL5 RDM1 CCL15 HEATR9 CCL15-CCL14 TAF15 CCL14 LYZL6 LRRC37A8P CCL23 CCL4
nsv833427	Chr.17:35958281 - 36115227 on Build GRCh38	Loss	CCL15-CCL14 CCL14 LOC101927339 CCL23 CCL4 CCL16 CCL18 CCL3 CCL15
nsv833424	Chr.17:35911883 - 36092128 on Build GRCh38	Gain	CCL15-CCL14 CCL14 LYZL6 LOC101927339 CCL23 CCL16 CCL18 CCL3 RDM1 CCL15

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cytokine, intercellular signal molecule

Gene Ontology Categories:

Process(es)

monocyte chemotaxis
chemotaxis
inflammatory response
cell communication
G-protein coupled receptor signaling pathway
cell-cell signaling
neutrophil chemotaxis
positive regulation of GTPase activity
lymphocyte chemotaxis
positive regulation of inflammatory response
positive chemotaxis
chemokine-mediated signaling pathway
positive regulation of ERK1 and ERK2 cascade
cellular response to interferon-gamma
cellular response to interleukin-1
cellular response to tumor necrosis factor

Function(s)

chemokine activity
chemoattractant activity
CCR chemokine receptor binding