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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88804790 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02512947_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 NP_112190.2
AB053172.1 BAB61878.1
AF070552.1
AF321125.1 AAG45181.1
BC000137.2 AAH00137.2
BC008676.1 AAH08676.1
BC008860.2 AAH08860.2
BC009410.1 AAH09410.1
BC021126.1
BC049205.1 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573677 Chr.16:88764428 - 88805821 on Build GRCh38 Loss CDT1 PIEZO1
dgv5313n54 Chr.16:88795879 - 88806103 on Build GRCh38 Loss CDT1
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC400558 LOC100289580 LOC101927793 LINC00304 CTU2 CDT1 TRAPPC2L LOC105371409 GALNS LOC107987238 ACSF3 PABPN1L LOC100129697 LOC339059 CDH15 PIEZO1 SLC22A31 APRT CBFA2T3 ZNF778 MIR4722
nsv457617 Chr.16:88801844 - 88829729 on Build GRCh38 Gain CDT1 GALNS LOC107987238 APRT
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain RNF166 LOC339059 SNAI3-AS1 LOC100289580 CTU2 CDT1 PIEZO1 GALNS LOC107987238 APRT MIR4722 SNAI3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC400558 LOC100289580 LOC101927793 LINC00304 CDT1 ANKRD11 TRAPPC2L LOC100287036 LOC105371409 GALNS LOC107987238 ACSF3 PABPN1L LOC100129697 LOC339059 CDH15 PIEZO1 SLC22A31 APRT CBFA2T3 ZNF778 LOC105371414
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC100129697 LOC101927793 CDT1 TRAPPC2L LOC105371409 GALNS LOC107987238 APRT CBFA2T3 PABPN1L
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss MC1R LOC100289580 LOC101927793 SPIRE2 DPEP1 LOC101927817 ACSF3 PABPN1L LOC100129697 LOC339059 FAM157C MVD PRDM7 SLC22A31 ZNF778 SNAI3 LOC105371419 LOC105371409 RPL13 VPS9D1 CENPBD1 RNF166 TUBB8P7 VPS9D1-AS1 CDH15 DEF8 GAS8 LOC107984817 LOC105371414 CYBA SNAI3-AS1 DBNDD1 LINC00304 SPATA33 CTU2 TRAPPC2L ZNF276 GALNS SNORD68 AFG3L1P SPATA2L GAS8-AS1 PIEZO1 SPG7 APRT CBFA2T3 TCF25 TUBB3 IL17C LOC400558 CPNE7 CDT1 ANKRD11 LOC100287036 LOC107987238 CHMP1A URAHP FANCA CDK10 MIR4722
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss CDT1 TRAPPC2L PIEZO1 GALNS LOC107987238 APRT
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC100129697 LOC101927793 CDT1 TRAPPC2L PIEZO1 LOC105371409 GALNS LOC107987238 APRT CBFA2T3 PABPN1L
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain LOC101927793 CDT1 TRAPPC2L PIEZO1 GALNS LOC107987238 APRT CBFA2T3 PABPN1L
nsv573715 Chr.16:88804814 - 88808224 on Build GRCh38 Loss CDT1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC100289580 LOC101927793 CTU2 CDT1 TRAPPC2L LOC105371409 GALNS LOC107987238 PABPN1L LOC100129697 LOC339059 PIEZO1 APRT CBFA2T3 MIR4722
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1

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