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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154506848 on build GRCh38
Cytoband
Xq28
Assay ID Hs02517957_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 10 1029 NP_001164603.1
NM_001171133.2 9 915 NP_001164604.1
NM_001171134.2 8 1075 NP_001164605.1
NM_001282311.1 10 1224 NP_001269240.1
NM_001282312.1 10 970 NP_001269241.1
NM_021806.3 9 1126 NP_068578.2
XM_005274714.3 11 1095 XP_005274771.1
XM_005274716.3 11 1074 XP_005274773.1
XM_005277879.4 9 984 XP_005277936.1
XM_006724831.2 11 1098 XP_006724894.1
XM_006724832.3 10 1059 XP_006724895.1
XM_006724833.2 10 1023 XP_006724896.1
XM_006724834.2 10 1211 XP_006724897.1
XM_011531185.2 8 656 XP_011529487.1
XM_017029699.1 9 1371 XP_016885188.1
XM_017029700.1 9 1346 XP_016885189.1
XM_017029701.1 10 1249 XP_016885190.1
XM_017029702.1 9 862 XP_016885191.1
AK024601.1 10 987
AK057945.1 10 844
AK124890.1 6 3317
AK294116.1 8 1038
AK314682.1 9 1044
BC002934.1 10 1128 AAH02934.1
BC008912.2 9 777 AAH08912.1
CX867071.1
X87193.1 9 933 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss TKTL1 OPN1MW3 LOC101927830 CH17-340M24.3 FUNDC2 HCFC1-AS1 PLXNA3 RAB39B FAM3A SNORA36A OPN1MW2 ATP6AP1 HCFC1 SMIM9 G6PD CTAG1A TEX28 FAM223B VBP1 MIR6858 SNORA56 OPN1MW GDI1 TAZ MIR1184-2 DKC1 IRAK1 MIR3202-1 CMC4 LOC107987332 F8A3 MTCP1 BRCC3 MIR664B CTAG2 F8A1 LAGE3 OPN1LW GAB3 F8A2 SLC10A3 H2AFB1 CLIC2 MPP1 TMLHE-AS1 UBL4A H2AFB2 TMEM187 SPRY3 LOC105373386 TMLHE FAM223A DNASE1L1 H2AFB3 CTAG1B F8 MIR1184-1 MIR3202-2 MECP2 IKBKG SNORA70 FLNA EMD RPL10 MIR718 MIR1184-3 FAM50A
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain LOC107987332 TKTL1 OPN1MW3 LAGE3 CH17-340M24.3 OPN1LW SLC10A3 PLXNA3 FAM3A OPN1MW2 UBL4A ATP6AP1 G6PD CTAG1A TEX28 LOC105373386 FAM223A MIR6858 DNASE1L1 OPN1MW GDI1 TAZ MECP2 IKBKG SNORA70 FLNA EMD RPL10 FAM50A
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss TKTL1 LOC105373377 OPN1MW3 HAUS7 PLXNB3 CH17-340M24.3 DUSP9 HCFC1-AS1 BGN PLXNA3 RENBP FAM3A PNCK PNMA6A SSR4 OPN1MW2 ATP6AP1 HCFC1 G6PD CTAG1A TEX28 MIR6858 LOC105373378 ZNF275 LCA10 OPN1MW GDI1 TAZ ATP2B3 LOC105373383 IRAK1 MIR3202-1 ARHGAP4 TREX2 LOC107987332 ZFP92 LAGE3 OPN1LW SLC10A3 L1CAM LOC107983954 UBL4A SLC6A8 TMEM187 NAA10 LOC105373386 FAM58A FAM223A SRPK3 DNASE1L1 MIR3202-2 IDH3G MECP2 IKBKG SNORA70 MAGEA1 BCAP31 PDZD4 FLNA LOC105373381 EMD ABCD1 RPL10 AVPR2 MIR718 FAM50A
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion G6PD CTAG1A IKBKG FAM223A FAM3A

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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