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See other APBA2 CNV Assays ›
Gene Symbol
APBA2
Assay Reference Genome
Location

Chr.15:28921607 on build GRCh38
Cytoband
15q13.1
Assay ID Hs02521778_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 321

Gene Name:

 amyloid beta precursor protein binding family A member 2

Gene Aliases:

 D15S1518E, HsT16821, LIN-10, MGC:14091, MINT2, X11-BETA, X11L

Location:

 Chr.15:28885479-29118315 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
APBA2 NM_001130414.1 NP_001123886.1
NM_005503.3 NP_005494.2
XM_011521488.2 XP_011519790.1
XM_011521489.2 XP_011519791.1
XM_011521490.2 XP_011519792.1
XM_011521493.2 XP_011519795.1
XM_011521494.2 XP_011519796.1
XM_017022101.1 XP_016877590.1
XM_017022102.1 XP_016877591.1
XM_017022103.1 XP_016877592.1
XM_017022104.1 XP_016877593.1
XM_017022105.1 XP_016877594.1
XM_017022106.1 XP_016877595.1
XM_017022107.1 XP_016877596.1
XM_017022108.1 XP_016877597.1
XM_017022109.1 XP_016877598.1
XM_017022110.1 XP_016877599.1
XM_017022113.1 XP_016877602.1
XM_017022114.1 XP_016877603.1
AF047348.1 AAC39767.1
AK310413.1
BC082986.1 AAH82986.1
BX332225.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss LOC105370746 GOLGA8R TJP1 GOLGA8M DKFZP434L187 LOC101060569 LOC100289656 GOLGA6L7P FAM189A1 PDCD6IPP2 CHRFAM7A GOLGA8J GOLGA8T LOC100130111 LOC107984752 WHAMMP2 APBA2 LOC105370751 ULK4P3 NSMCE3
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain TJP1 LOC100130111 LOC107984752 LOC100289656 WHAMMP2 GOLGA6L7P FAM189A1 PDCD6IPP2 APBA2 NSMCE3
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss TJP1 DKFZP434L187 LOC100289656 GOLGA6L7P CHRFAM7A LOC101927579 LOC100288637 GOLGA8T LOC100130111 WHAMMP2 ULK4P2 LOC105370751 NSMCE3 LOC105370746 GOLGA8R ARHGAP11B GOLGA8H LOC101060569 FAM189A1 PDCD6IPP2 GOLGA8J LOC100996413 LOC107984752 APBA2 ULK4P3
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain TJP1 LOC100289656 GOLGA6L7P FAM189A1 PDCD6IPP2 GOLGA8J GOLGA8T LOC100130111 LOC107984752 WHAMMP2 APBA2 ULK4P3 NSMCE3
nsv516384 Chr.15:28920744 - 28996217 on Build GRCh38 Loss APBA2
nsv568662 Chr.15:27726493 - 29056123 on Build GRCh38 Gain GOLGA8M LOC100289656 GOLGA6L7P PDCD6IPP2 HERC2P11 OCA2 LOC100132202 LOC101929047 MIR4509-3 HERC2P9 HERC2 LOC107984752 WHAMMP2 GOLGA8F GOLGA8G APBA2 MIR4509-2 LOC645202

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More Information


Additional Information:

For this assay, SNP(s) [rs77027895] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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