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See other LOC100288152 CNV Assays ›
Gene Symbol
LOC100288152
Assay Reference Genome
Location

Chr.5:476330 on build GRCh38
Cytoband
5p15.33
Assay ID Hs02523532_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100288152

Gene Name:

 uncharacterized LOC100288152

Gene Aliases:

 -

Location:

 Chr.5:473236-480892 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100288152 NR_125375.1 3 446
BI222796.1 3 447
BQ954611.1

Target Gene Details

Entrez Gene ID:

 6550

Gene Name:

 solute carrier family 9 member A3

Gene Aliases:

 DIAR8, NHE-3, NHE3

Location:

 Chr.5:471986-524434 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A3 NM_001284351.2 NP_001271280.1
NM_004174.3 NP_004165.2
BC101669.1 AAI01670.1
BC101671.1 AAI01672.1
BC143328.1
U28043.1 AAB48990.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3894107 Chr.5:81322 - 801057 on Build GRCh38 Gain LOC101929895 ZDHHC11 SLC9A3 LOC100996325 LRRC14B PLEKHG4B EXOC3-AS1 EXOC3 PDCD6 CCDC127 TPPP HRAT5 ZDHHC11B SDHA LOC100288152 PP7080 CEP72 AHRR MIR4456
nsv822926 Chr.5:471229 - 543871 on Build GRCh38 Gain EXOC3 LOC100288152 SLC9A3 PP7080 MIR4456
nsv830183 Chr.5:349237 - 502409 on Build GRCh38 Gain+Loss EXOC3 LOC100288152 SLC9A3 PP7080 AHRR EXOC3-AS1
nsv596691 Chr.5:474296 - 492304 on Build GRCh38 Loss LOC100288152 SLC9A3
nsv1032584 Chr.5:375290 - 809679 on Build GRCh38 Gain LOC101929895 ZDHHC11 SLC9A3 LOC100996325 EXOC3-AS1 EXOC3 TPPP ZDHHC11B LOC100288152 PP7080 CEP72 AHRR MIR4456
nsv461889 Chr.5:429874 - 598109 on Build GRCh38 Gain EXOC3 LOC100288152 SLC9A3 PP7080 AHRR EXOC3-AS1 MIR4456
nsv527666 Chr.5:457146 - 490122 on Build GRCh38 Loss EXOC3 LOC100288152 SLC9A3 PP7080
dgv9479n54 Chr.5:438449 - 567131 on Build GRCh38 Gain EXOC3 LOC100288152 SLC9A3 PP7080 EXOC3-AS1 MIR4456
esv2759315 Chr.5:17263 - 595840 on Build GRCh38 Loss SLC9A3 LRRC14B PLEKHG4B EXOC3-AS1 EXOC3 PDCD6 CCDC127 HRAT5 SDHA LOC100288152 PP7080 AHRR MIR4456
esv3603744 Chr.5:359572 - 478120 on Build GRCh38 Gain EXOC3 LOC100288152 SLC9A3 PP7080 AHRR EXOC3-AS1
nsv521554 Chr.5:474989 - 495262 on Build GRCh38 Loss LOC100288152 SLC9A3
nsv4674 Chr.5:454921 - 488099 on Build GRCh38 Insertion EXOC3 LOC100288152 SLC9A3 PP7080
nsv1027279 Chr.5:337575 - 531110 on Build GRCh38 Gain EXOC3 LOC100288152 SLC9A3 PP7080 AHRR EXOC3-AS1
nsv1019215 Chr.5:346521 - 661696 on Build GRCh38 Gain EXOC3 TPPP LOC100288152 SLC9A3 PP7080 LOC100996325 CEP72 AHRR EXOC3-AS1 MIR4456
esv2752071 Chr.5:378298 - 699075 on Build GRCh38 Gain EXOC3 LOC101929895 TPPP LOC100288152 SLC9A3 PP7080 LOC100996325 CEP72 AHRR EXOC3-AS1 MIR4456
dgv9493n54 Chr.5:474507 - 487159 on Build GRCh38 Loss LOC100288152 SLC9A3

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