Hs02570792_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67873175 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4	1	153	NP_055144.3
	AK128582.1	1	124
	BC043616.1	1	56	AAH43616.1
	BC064567.1	1	50	AAH64567.1
	BX445706.2	1	105
	DC403765.1	1	154
	L26339.1	1	49	AAA21833.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	ATP6V0D1 C16orf86 CTCF EXOC3L1 CTRL ZDHHC1 KIAA0895L HSD11B2 PSMB10 LOC105369155 ENKD1 ELMO3 LRRC29 TSNAXIP1 TMEM208 DUS2 RANBP10 EDC4 SLC12A4 LOC100505942 THAP11 TRADD GFOD2 PSKH1 HSF4 CENPT PARD6A LOC100131303 FAM65A NRN1L E2F4 ACD PLEKHG4 FHOD1 FBXL8 SLC9A5 DPEP3 LOC107984813 CARMIL2 AGRP NOL3 LCAT NUTF2 MIR328 LRRC36 DPEP2 KCTD19 DDX28 TPPP3
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	PSKH1 NRN1L EDC4 NUTF2
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	ATP6V0D1 C16orf86 CTCF EXOC3L1 CTRL ZDHHC1 KIAA0895L C16orf70 B3GNT9 HSD11B2 PSMB10 LOC105369155 ENKD1 ELMO3 LRRC29 TSNAXIP1 TMEM208 DUS2 RANBP10 EDC4 SLC12A4 LOC100505942 THAP11 TRADD GFOD2 PSKH1 HSF4 CENPT PARD6A LOC100131303 FAM65A NRN1L E2F4 ACD PLEKHG4 FHOD1 FBXL8 SLC9A5 DPEP3 LOC107984813 CARMIL2 AGRP NOL3 LCAT NUTF2 MIR328 LRRC36 DPEP2 KCTD19 DDX28 TPPP3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding