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See other CHL1 CNV Assays ›
Gene Symbol
CHL1
Assay Reference Genome
Location

Chr.3:244648 on build GRCh38
Cytoband
3p26.3
Assay ID Hs02581987_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10752

Gene Name:

 cell adhesion molecule L1 like

Gene Aliases:

 CALL, L1CAM2

Location:

 Chr.3:196588-409417 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHL1 NM_001253387.1 NP_001240316.1
NM_006614.3 NP_006605.2
NR_045572.1
XM_006712938.1 XP_006713001.1
XM_006712939.3 XP_006713002.1
XM_006712940.3 XP_006713003.1
XM_011533292.1 XP_011531594.1
XM_011533294.1 XP_011531596.1
XM_011533295.1 XP_011531597.1
XM_011533296.1 XP_011531598.1
XM_017005566.1 XP_016861055.1
XM_017005567.1 XP_016861056.1
XM_017005569.1 XP_016861058.1
XM_017005570.1 XP_016861059.1
XM_017005571.1 XP_016861060.1
XM_017005572.1 XP_016861061.1
XM_017005573.1 XP_016861062.1
AB209329.1 BAD92566.1
AF002246.1 AAB60937.1
AK055236.1
AK126878.1
DA778898.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759122 Chr.3:29482 - 756820 on Build GRCh38 Gain+Loss LOC101927174 CHL1 LINC01266 CHL1-AS1
esv3594872 Chr.3:36658 - 319672 on Build GRCh38 Loss LOC101927174 CHL1
esv2667629 Chr.3:39576 - 1039187 on Build GRCh38 Deletion LOC101927174 CHL1 LINC01266 CHL1-AS1 CNTN6
nsv1001867 Chr.3:193194 - 252963 on Build GRCh38 Gain LOC101927174 CHL1
esv3575528 Chr.3:241068 - 275532 on Build GRCh38 Gain CHL1
nsv834589 Chr.3:235505 - 395503 on Build GRCh38 Gain CHL1 CHL1-AS1
dgv4608n100 Chr.3:18655 - 438490 on Build GRCh38 Gain LOC101927174 LOC102723448 CHL1 CHL1-AS1
esv3893585 Chr.3:44574 - 267680 on Build GRCh38 Gain LOC101927174 CHL1
nsv1015017 Chr.3:213712 - 259215 on Build GRCh38 Gain CHL1
dgv4613n100 Chr.3:52474 - 1799230 on Build GRCh38 Loss LOC101927174 CHL1 LINC01266 CHL1-AS1 CNTN6
nsv460305 Chr.3:228838 - 275462 on Build GRCh38 Loss CHL1
esv2751984 Chr.3:168062 - 253971 on Build GRCh38 Gain LOC101927174 CHL1
dgv4614n100 Chr.3:214575 - 294771 on Build GRCh38 Gain CHL1
nsv1010970 Chr.3:188327 - 1623352 on Build GRCh38 Gain LOC101927174 CHL1 LINC01266 CHL1-AS1 CNTN6
esv3594892 Chr.3:239056 - 271185 on Build GRCh38 Loss CHL1
dgv852e214 Chr.3:210087 - 263700 on Build GRCh38 Gain CHL1
nsv526340 Chr.3:21733 - 2305176 on Build GRCh38 Loss CNTN4-AS2 LOC101927174 LOC102723448 CHL1 LINC01266 CHL1-AS1 CNTN6 CNTN4
esv3594893 Chr.3:242814 - 379641 on Build GRCh38 Loss CHL1 CHL1-AS1
nsv428412 Chr.3:29467 - 326726 on Build GRCh38 Gain LOC101927174 CHL1
nsv589283 Chr.3:192626 - 321571 on Build GRCh38 Gain LOC101927174 CHL1
nsv999459 Chr.3:230573 - 288287 on Build GRCh38 Loss CHL1
esv2763731 Chr.3:243604 - 1386714 on Build GRCh38 Gain+Loss CHL1 LINC01266 CHL1-AS1 CNTN6
nsv1004600 Chr.3:244100 - 607771 on Build GRCh38 Loss CHL1 LINC01266 CHL1-AS1
nsv1160911 Chr.3:235990 - 247092 on Build GRCh38 Duplication CHL1
nsv589285 Chr.3:211890 - 255638 on Build GRCh38 Loss CHL1
nsv589242 Chr.3:47730 - 388999 on Build GRCh38 Gain LOC101927174 CHL1 CHL1-AS1

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