Hs02622817_cn

• Gene Symbol: GALNT13
• Assay Reference Genome Location: Chr.2:154452311 on build GRCh38
• Cytoband: 2q24.1

Target Gene Details

• Entrez Gene ID: 114805
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 13
• Gene Aliases: GalNAc-T13
• Location: Chr.2:153871898-154454177 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GALNT13	NM_001301627.1	12	3703	NP_001288556.1
	NM_052917.3	13	4013	NP_443149.2
	XM_011510537.2	14	4206	XP_011508839.1
	XM_011510538.2	12	3618	XP_011508840.1
	XM_017003258.1	14	4060	XP_016858747.1
	XM_017003259.1	13	3785	XP_016858748.1
	XM_017003260.1	14	4176	XP_016858749.1
	XM_017003261.1	13	3872	XP_016858750.1
	XM_017003263.1	11	3420	XP_016858752.1
	AB067505.1	11	3313	BAB67811.1

Target Gene Details

• Entrez Gene ID: 100144595
• Gene Name: uncharacterized LOC100144595
• Gene Aliases: -
• Location: Chr.2:154435853-154457438 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100144595	NM_001256368.1			NP_001243297.1
	AK090913.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv583422	Chr.2:154406489 - 154475974 on Build GRCh38	Loss	GALNT13 LOC100144595
nsv583421	Chr.2:154401008 - 154524026 on Build GRCh38	Loss	GALNT13 LOC100144595
esv3592991	Chr.2:154445647 - 154453382 on Build GRCh38	Gain	GALNT13 LOC100144595
esv3592992	Chr.2:154447556 - 154553185 on Build GRCh38	Loss	GALNT13 LOC100144595

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

O-glycan processing

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
carbohydrate binding
metal ion binding