Genomic Map
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Target Gene Details
Entrez Gene ID: | 285 |
Gene Name: | angiopoietin 2 |
Gene Aliases: |
AGPT2, ANG2 |
Location: |
Chr.8:6499651-6563420 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ANGPT2 | NM_001118887.1 | 9 | 2139 | NP_001112359.1 |
| NM_001118888.1 | 8 | 1986 | NP_001112360.1 | |
| NM_001147.2 | 9 | 2142 | NP_001138.1 | |
| XM_017013318.1 | 8 | 2140 | XP_016868807.1 | |
| AF004327.1 | 9 | 2162 | AAB63190.1 | |
| AF218015.1 | AAG17257.1 | |||
| AK075219.1 | 9 | 2120 | ||
| AK290070.1 |
Target Gene Details
Entrez Gene ID: | 79648 |
Gene Name: | microcephalin 1 |
Gene Aliases: |
BRIT1, MCT |
Location: |
Chr.8:6406592-6648505 on Build GRCh38 |
Assay Gene Location: | Within Intron 13 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MCPH1 | NM_001322042.1 | NP_001308971.1 | ||
| NM_024596.4 | NP_078872.2 | |||
| XM_011534755.2 | XP_011533057.1 | |||
| XM_011534756.2 | XP_011533058.1 | |||
| XM_011534757.2 | XP_011533059.1 | |||
| XM_011534758.2 | XP_011533060.1 | |||
| XM_011534759.2 | XP_011533061.1 | |||
| XM_011534760.2 | XP_011533062.1 | |||
| XM_017013829.1 | XP_016869318.1 | |||
| XM_017013830.1 | XP_016869319.1 | |||
| XM_017013831.1 | XP_016869320.1 | |||
| XM_017013832.1 | XP_016869321.1 | |||
| XM_017013833.1 | XP_016869322.1 | |||
| XM_017013834.1 | XP_016869323.1 | |||
| AI480294.1 | ||||
| AK022909.1 | BAB14304.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss |
 AGPAT5
DEFA4
MIR4659B
GS1-24F4.2
MIR4659A
ANGPT2
MCPH1
DEFA8P
DEFB1
XKR5
MCPH1-AS1
DEFA6
MIR8055
|
| nsv1022895 | Chr.8:6497692 - 6557353 on Build GRCh38 | Loss |
MCPH1
ANGPT2
|
| nsv1025860 | Chr.8:6471107 - 6503222 on Build GRCh38 | Loss |
MCPH1
ANGPT2
|
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Additional Information:
For this assay, SNP(s) [rs76020419] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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