Name: [Hs02653983_cn] [AMACR]
Creator: Thermo Fisher Scientific
Keywords: [AMACR] Assay, [alpha-methylacyl-CoA racemase] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	23600
Gene Name:	alpha-methylacyl-CoA racemase
Gene Aliases:	AMACRD, CBAS4, RACE, RM
Location:	Chr.5:33986986-34008115 on Build GRCh38
Assay Gene Location:	Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AMACR	NM_001167595.1	5	1109	NP_001161067.1
	NM_014324.5	5	1109	NP_055139.4
	NM_203382.2	4	948	NP_976316.1
	AF047020.1	5	1101	AAD10205.1
	AF158378.1	5	1078	AAF22610.1
	AJ130733.1	5	1101	CAB44062.1
	AK000912.1	5	1094
	AK222831.1	5	1081	BAD96551.1
	AK225749.1	5	1118
	AK292988.1
	AL571115.3	1	522
	AY935981.1	5	1022	AAY16192.1
	BC009471.1	4	864	AAH09471.1
	BQ941482.1	3	618
	EF560721.1	5	1032
	FJ498906.1	5	907
	FJ498907.1	5	907
	FJ498908.1	5	1037

Entrez Gene ID:	100534612
Gene Name:	C1QTNF3-AMACR readthrough (NMD candidate)
Gene Aliases:	-
Location:	Chr.5:33986986-34124528 on Build GRCh38
Assay Gene Location:	Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C1QTNF3-AMACR	NR_037951.1	9	1369
C1QTNF3-AMACR	AB209261.1	9	1378	BAD92498.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3604666	Chr.5:33947465 - 34004885 on Build GRCh38	Gain	AMACR SLC45A2 C1QTNF3-AMACR
nsv830255	Chr.5:33929507 - 34109160 on Build GRCh38	Loss	AMACR C1QTNF3 SLC45A2 C1QTNF3-AMACR RXFP3
nsv519240	Chr.5:33950598 - 34749311 on Build GRCh38	Gain	RAI14 AMACR LOC105374753 C1QTNF3 SLC45A2 C1QTNF3-AMACR LOC646652
nsv1019937	Chr.5:33921280 - 33990689 on Build GRCh38	Loss	AMACR SLC45A2 C1QTNF3-AMACR RXFP3
nsv522715	Chr.5:33319157 - 34037875 on Build GRCh38	Gain	AMACR ADAMTS12 C1QTNF3 SLC45A2 C1QTNF3-AMACR RXFP3 TARS