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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154511821 on build GRCh38
Cytoband
Xq28
Assay ID Hs02706495_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss FAM223A ATP6AP1 FAM50A OPN1MW3 TMLHE TAZ GAB3 F8 G6PD HCFC1 LOC107987332 DKC1 VBP1 F8A3 MIR718 OPN1MW2 IKBKG FUNDC2 H2AFB3 OPN1MW MIR1184-2 SPRY3 DNASE1L1 F8A2 MIR1184-3 MTCP1 TMLHE-AS1 CTAG1A RAB39B UBL4A CH17-340M24.3 PLXNA3 BRCC3 OPN1LW MECP2 MIR3202-1 H2AFB1 SNORA36A TEX28 MIR3202-2 TKTL1 CTAG2 SNORA56 TMEM187 LAGE3 F8A1 FAM3A RPL10 MIR1184-1 MIR6858 LOC101927830 IRAK1 EMD GDI1 MPP1 CLIC2 FLNA H2AFB2 LOC105373386 FAM223B CMC4 SLC10A3 MIR664B CTAG1B SMIM9 SNORA70 HCFC1-AS1
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain PLXNA3 OPN1LW MECP2 FAM223A ATP6AP1 FAM50A OPN1MW3 TEX28 TAZ TKTL1 G6PD LAGE3 FAM3A LOC107987332 RPL10 MIR6858 EMD OPN1MW2 GDI1 IKBKG FLNA OPN1MW LOC105373386 DNASE1L1 SLC10A3 CTAG1A SNORA70 UBL4A CH17-340M24.3
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss LOC105373378 FAM223A ATP6AP1 FAM50A OPN1MW3 ATP2B3 L1CAM TAZ NAA10 PDZD4 G6PD HCFC1 FAM58A LOC107987332 ABCD1 MIR718 ARHGAP4 OPN1MW2 IKBKG LCA10 AVPR2 PLXNB3 OPN1MW DUSP9 LOC105373377 DNASE1L1 SSR4 ZNF275 CTAG1A MAGEA1 UBL4A BCAP31 CH17-340M24.3 PLXNA3 OPN1LW MECP2 MIR3202-1 TEX28 MIR3202-2 TKTL1 LOC105373383 BGN TMEM187 LAGE3 RENBP FAM3A RPL10 MIR6858 IRAK1 EMD SRPK3 TREX2 PNCK PNMA6A GDI1 LOC107983954 FLNA LOC105373381 LOC105373386 SLC10A3 HAUS7 SLC6A8 ZFP92 IDH3G SNORA70 HCFC1-AS1
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion G6PD FAM3A IKBKG FAM223A CTAG1A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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