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See other FAM3A CNV Assays ›
Gene Symbol
FAM3A
Assay Reference Genome
Location

Chr.X:154511821 on build GRCh38
Cytoband
Xq28
Assay ID Hs02706495_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 60343

Gene Name:

 family with sequence similarity 3 member A

Gene Aliases:

 2.19, DLD, DXS560S, XAP-7

Location:

 Chr.X:154506159-154516249 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM3A NM_001171132.2 NP_001164603.1
NM_001171133.2 NP_001164604.1
NM_001171134.2 NP_001164605.1
NM_001282311.1 NP_001269240.1
NM_001282312.1 NP_001269241.1
NM_021806.3 NP_068578.2
XM_005274714.3 XP_005274771.1
XM_005274716.3 XP_005274773.1
XM_005277879.4 XP_005277936.1
XM_006724831.2 XP_006724894.1
XM_006724832.3 XP_006724895.1
XM_006724833.2 XP_006724896.1
XM_006724834.2 XP_006724897.1
XM_011531185.2 XP_011529487.1
XM_017029699.1 XP_016885188.1
XM_017029700.1 XP_016885189.1
XM_017029701.1 XP_016885190.1
XM_017029702.1 XP_016885191.1
AK024601.1
AK057945.1
AK294116.1
AK314682.1
AL539139.3
BC002934.1 AAH02934.1
BC008912.2 AAH08912.1
BM457676.1
CX867071.1
X87193.1 CAA60645.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33784 Chr.X:153962665 - 155699588 on Build GRCh38 Gain+Loss MIR3202-1 VBP1 TEX28 FAM223B F8A1 CH17-340M24.3 BRCC3 MIR6858 TAZ CLIC2 UBL4A FLNA MIR664B MTCP1 FUNDC2 MPP1 MIR3202-2 OPN1LW LOC107987332 OPN1MW2 H2AFB2 PLXNA3 FAM50A FAM3A FAM223A MIR1184-3 RPL10 H2AFB1 SMIM9 SPRY3 G6PD MIR1184-2 DNASE1L1 LOC101927830 IRAK1 ATP6AP1 TKTL1 CMC4 F8A3 TMLHE MIR718 LOC105373386 SLC10A3 DKC1 H2AFB3 RAB39B MECP2 OPN1MW SNORA70 CTAG1A CTAG1B MIR1184-1 CTAG2 SNORA56 GAB3 HCFC1 F8 GDI1 HCFC1-AS1 IKBKG F8A2 EMD TMLHE-AS1 LAGE3 SNORA36A OPN1MW3 TMEM187
nsv519042 Chr.X:154082978 - 154601444 on Build GRCh38 Gain TKTL1 TEX28 CH17-340M24.3 MIR6858 LOC105373386 TAZ SLC10A3 UBL4A FLNA MECP2 OPN1MW SNORA70 CTAG1A OPN1LW LOC107987332 OPN1MW2 PLXNA3 FAM50A GDI1 FAM3A FAM223A IKBKG EMD RPL10 LAGE3 G6PD OPN1MW3 DNASE1L1 ATP6AP1
esv33199 Chr.X:153065734 - 154591978 on Build GRCh38 Gain+Loss MIR3202-1 TEX28 CH17-340M24.3 NAA10 PNMA6A MIR6858 TAZ PNCK SLC6A8 IDH3G UBL4A ATP2B3 FLNA LOC105373383 LOC105373377 AVPR2 ABCD1 LOC105373378 TREX2 MIR3202-2 OPN1LW LOC107987332 OPN1MW2 PLXNA3 ZNF275 FAM50A SRPK3 FAM3A FAM223A RPL10 G6PD L1CAM PDZD4 DNASE1L1 IRAK1 ATP6AP1 TKTL1 HAUS7 PLXNB3 LCA10 MIR718 LOC105373386 SLC10A3 MECP2 OPN1MW ZFP92 SNORA70 CTAG1A FAM58A LOC107983954 DUSP9 BGN HCFC1 ARHGAP4 BCAP31 SSR4 GDI1 HCFC1-AS1 IKBKG LOC105373381 EMD LAGE3 MAGEA1 RENBP OPN1MW3 TMEM187
nsv508816 Chr.X:154492171 - 154591783 on Build GRCh38 Insertion FAM223A IKBKG CTAG1A G6PD FAM3A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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