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Gene Symbol
HSPA1L
Assay Reference Genome
Location

Chr.6:31810834 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02719949_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3305

Gene Name:

 heat shock protein family A (Hsp70) member 1 like

Gene Aliases:

 HSP70-1L, HSP70-HOM, HSP70T, hum70t

Location:

 Chr.6:31809619-31815058 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HSPA1L NM_005527.3 2 1322 NP_005518.3
AK223386.1 2 1296 BAD97106.1
AK295416.1 2 1556
AK302179.1 2 1291
AK315227.1 2 1232
BC034483.1 2 1299 AAH34483.1
D85730.1 2 1274 BAA32521.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv823503 Chr.6:31810492 - 31811959 on Build GRCh38 Loss HSPA1L
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion STK19 GPSM3 MSH5-SAPCD1 DDX39B-AS1 RNF5 PPT2 LY6G5C HSPA1A HCG23 SAPCD1-AS1 C2 FKBPL SNORD48 MIR6833 LY6G6C C2-AS1 LOC102725068 SNORA38 MIR6832 SNORD52 LOC101929163 C6orf25 MIR4646 C4B BTNL2 MCCD1 ATF6B PPT2-EGFL8 CFB DXO GPANK1 SNORD117 PRRT1 SNORD84 ATP6V1G2-DDX39B HLA-DRB5 MICB LY6G6D HLA-DRB6 DDAH2 EGFL8 PBX2 CYP21A1P LY6G5B MIR6721 C6orf48 AIF1 LSM2 VARS AGER LST1 TNF MSH5 HCG26 HLA-DRA BAG6 ATP6V1G2 LY6G6E SLC44A4 AGPAT1 NOTCH4 NEU1 SAPCD1 C6orf10 HLA-DRB1 CSNK2B PRRC2A NELFE C6orf47 EHMT2 CYP21A2 HSPA1B SKIV2L DDX39B LY6G6F LOC100507547 ZBTB12 HCP5 HSPA1L VWA7 C4A LOC100287329 LTB APOM MIR1236 TNXB NCR3 TNXA CLIC1 LTA NFKBIL1 ABHD16A
nsv823502 Chr.6:31809880 - 31811846 on Build GRCh38 Loss HSPA1L
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss STK19 MICA MSH5-SAPCD1 DDX39B-AS1 LY6G5C HSPA1A SAPCD1-AS1 C2 SNORD48 LY6G6C C2-AS1 LOC102725068 SNORA38 MIR6832 SNORD52 C6orf25 MIR4646 C4B MCCD1 CFB DXO GPANK1 SNORD117 SNORD84 ATP6V1G2-DDX39B MICB LY6G6D DDAH2 CYP21A1P LY6G5B C6orf48 AIF1 LSM2 VARS LST1 TNF MSH5 HCG26 BAG6 ATP6V1G2 LY6G6E SLC44A4 NEU1 SAPCD1 CSNK2B MIR6891 PRRC2A NELFE C6orf47 EHMT2 CYP21A2 HSPA1B SKIV2L DDX39B LY6G6F ZBTB12 HCP5 HSPA1L VWA7 C4A LOC100287329 LTB APOM MIR1236 TNXB NCR3 TNXA CLIC1 LTA HLA-B NFKBIL1 ABHD16A
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion STK19 ZBTB9 MSH5-SAPCD1 DDX39B-AS1 RNF5 PPT2 LY6G5C DAXX HSPA1A SAPCD1-AS1 C2 MIR6873 FKBPL COL11A2 KIFC1 MIR6833 VPS52 LY6G6C LOC102725068 MIR6832 RPS18 BTNL2 ATF6B PSMB8 GPANK1 SNORD117 HLA-DQB1-AS1 PRRT1 MIR5004 MICB LY6G6D CUTA DDAH2 RING1 CYP21A1P LY6G5B MIR6721 PSMB8-AS1 HLA-DQB1 LST1 TNF HCG26 SLC44A4 AGPAT1 NEU1 PSMB9 HCG25 CSNK2B PPP1R2P1 PRRC2A PFDN6 CYP21A2 HSPA1B HLA-DOA ZBTB22 SKIV2L HLA-DMB DDX39B VWA7 TNXB HLA-DQB2 B3GALT4 SYNGAP1 CLIC1 ABHD16A HLA-DQA1 GPSM3 LOC100294145 RXRB HCG23 SNORD48 HLA-DQA2 TAP1 C2-AS1 SNORA38 SNORD52 LOC101929163 C6orf25 MIR4646 HSD17B8 C4B PHF1 MCCD1 SLC39A7 PPT2-EGFL8 CFB DXO HLA-DPA1 SNORD84 ATP6V1G2-DDX39B HLA-DRB5 TAPBP HLA-DRB6 EGFL8 PBX2 C6orf48 AIF1 LSM2 MIR219A1 VARS AGER MSH5 MIR3135B HLA-DRA BAG6 ATP6V1G2 LY6G6E HCG24 NOTCH4 BRD2 HLA-DMA SAPCD1 C6orf10 HLA-DRB1 MIR6834 HLA-DPB2 NELFE WDR46 C6orf47 EHMT2 LY6G6F TAP2 HLA-DPB1 LOC100507547 ZBTB12 HCP5 HSPA1L C4A LOC100287329 LTB APOM HLA-DOB MIR1236 RGL2 NCR3 TNXA LTA NFKBIL1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion STK19 ZBTB9 MSH5-SAPCD1 DDX39B-AS1 RNF5 PPT2 LY6G5C DAXX HSPA1A SAPCD1-AS1 C2 MIR6873 FKBPL COL11A2 KIFC1 MIR6833 VPS52 LY6G6C LOC102725068 MIR6832 RPS18 BTNL2 ATF6B PSMB8 GPANK1 SNORD117 HLA-DQB1-AS1 PRRT1 MIR5004 MICB LY6G6D CUTA DDAH2 RING1 CYP21A1P LY6G5B MIR6721 PSMB8-AS1 HLA-DQB1 LST1 TNF HCG26 SLC44A4 AGPAT1 NEU1 PSMB9 HCG25 CSNK2B PPP1R2P1 PRRC2A PFDN6 CYP21A2 HSPA1B HLA-DOA ZBTB22 SKIV2L HLA-DMB DDX39B VWA7 TNXB HLA-DQB2 B3GALT4 SYNGAP1 CLIC1 ABHD16A HLA-DQA1 GPSM3 LOC100294145 RXRB HCG23 SNORD48 HLA-DQA2 TAP1 C2-AS1 SNORA38 SNORD52 LOC101929163 C6orf25 MIR4646 HSD17B8 C4B PHF1 MCCD1 SLC39A7 PPT2-EGFL8 CFB DXO HLA-DPA1 SNORD84 ATP6V1G2-DDX39B HLA-DRB5 TAPBP HLA-DRB6 EGFL8 PBX2 C6orf48 AIF1 LSM2 MIR219A1 VARS AGER MSH5 MIR3135B HLA-DRA BAG6 ATP6V1G2 LY6G6E HCG24 NOTCH4 BRD2 HLA-DMA SAPCD1 C6orf10 HLA-DRB1 MIR6834 HLA-DPB2 NELFE WDR46 C6orf47 EHMT2 LY6G6F TAP2 HLA-DPB1 LOC100507547 ZBTB12 HCP5 HSPA1L C4A LOC100287329 LTB APOM HLA-DOB MIR1236 RGL2 NCR3 TNXA LTA NFKBIL1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss STK19 GPSM3 MICA MSH5-SAPCD1 DDX39B-AS1 RNF5 PPT2 LY6G5C HSPA1A HCG23 SAPCD1-AS1 C2 FKBPL SNORD48 MIR6833 LY6G6C C2-AS1 LOC102725068 SNORA38 MIR6832 SNORD52 LOC101929163 C6orf25 MIR4646 C4B BTNL2 MCCD1 ATF6B PPT2-EGFL8 CFB DXO GPANK1 SNORD117 PRRT1 SNORD84 ATP6V1G2-DDX39B MICB LY6G6D DDAH2 EGFL8 PBX2 CYP21A1P LY6G5B MIR6721 C6orf48 AIF1 LSM2 VARS AGER LST1 TNF MSH5 HCG26 HLA-DRA BAG6 ATP6V1G2 LY6G6E SLC44A4 AGPAT1 NOTCH4 NEU1 SAPCD1 C6orf10 CSNK2B MIR6891 PRRC2A NELFE C6orf47 EHMT2 CYP21A2 HSPA1B SKIV2L DDX39B LY6G6F LOC100507547 ZBTB12 HCP5 HSPA1L VWA7 C4A LOC100287329 LTB APOM MIR1236 TNXB NCR3 TNXA CLIC1 LTA HLA-B NFKBIL1 ABHD16A
dgv10461n54 Chr.6:31810495 - 31896527 on Build GRCh38 Loss HSPA1L SNORD48 SLC44A4 EHMT2 HSPA1B NEU1 SNORD52 HSPA1A C6orf48

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