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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31659472 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02736215_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 1301 NP_067007.3
AJ245433.1 1 1262 CAB51603.1
AK315349.1 1 990
BC012950.1 1 1301 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion C6orf48 VARS BAG6 MIR1236 LOC101929163 CLIC1 MIR6832 HSPA1L LSM2 EHMT2 TNXB ABHD16A CYP21A1P GPSM3 SNORA38 PPT2-EGFL8 BTNL2 LOC102725068 CYP21A2 ATP6V1G2-DDX39B NOTCH4 STK19 MICB FKBPL SAPCD1 AGER TNF PRRC2A AGPAT1 RNF5 C2 HLA-DRA HSPA1B TNXA EGFL8 LST1 PRRT1 C4B PBX2 PPT2 MIR4646 HLA-DRB5 HLA-DRB6 SKIV2L GPANK1 C6orf25 NCR3 APOM SNORD117 HLA-DRB1 HCP5 LY6G6D LY6G6E DDX39B-AS1 VWA7 LY6G6F CSNK2B NELFE C6orf10 C2-AS1 SNORD48 ZBTB12 AIF1 MCCD1 C6orf47 SNORD84 NFKBIL1 ATP6V1G2 MSH5 LOC100287329 MSH5-SAPCD1 LY6G5C HCG26 C4A DDX39B LOC100507547 DXO LTA SAPCD1-AS1 HCG23 NEU1 DDAH2 LY6G5B ATF6B LY6G6C CFB HSPA1A MIR6833 LTB SNORD52 SLC44A4 MIR6721
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss BAG6 AIF1 PRRC2A C6orf47 SNORA38 GPANK1 APOM MIR6832
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss C6orf48 VARS BAG6 MIR1236 CLIC1 MIR6832 HSPA1L LSM2 EHMT2 TNXB ABHD16A CYP21A1P SNORA38 LOC102725068 CYP21A2 ATP6V1G2-DDX39B STK19 MICB SAPCD1 MIR6891 TNF PRRC2A C2 HSPA1B TNXA LST1 C4B MIR4646 SKIV2L GPANK1 C6orf25 NCR3 APOM SNORD117 HCP5 LY6G6D LY6G6E DDX39B-AS1 VWA7 LY6G6F CSNK2B NELFE C2-AS1 SNORD48 ZBTB12 AIF1 MCCD1 C6orf47 SNORD84 NFKBIL1 MICA ATP6V1G2 MSH5 HLA-B LOC100287329 MSH5-SAPCD1 LY6G5C HCG26 C4A DDX39B DXO LTA SAPCD1-AS1 NEU1 DDAH2 LY6G5B LY6G6C CFB HSPA1A LTB SNORD52 SLC44A4
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DQA1 VARS BRD2 MIR219A1 MIR1236 LOC101929163 CLIC1 ZBTB9 MIR6832 LSM2 HLA-DMB TNXB ABHD16A CYP21A1P GPSM3 CUTA BTNL2 ATP6V1G2-DDX39B ZBTB22 SLC39A7 AGPAT1 HLA-DQB1 RNF5 C2 HLA-DQB2 HLA-DRA EGFL8 PSMB8-AS1 LST1 PBX2 PPT2 HLA-DRB6 GPANK1 MIR6834 C6orf25 NCR3 TAPBP RING1 VWA7 CSNK2B NELFE C6orf10 SNORD48 PPP1R2P1 AIF1 MCCD1 C6orf47 LOC100287329 LOC100294145 PFDN6 MSH5-SAPCD1 PSMB9 WDR46 KIFC1 TAP2 LY6G5C DXO NEU1 LY6G5B HCG25 ATF6B VPS52 HSPA1A MIR6833 LTB SNORD52 MIR6721 C6orf48 BAG6 HLA-DPA1 HSPA1L B3GALT4 EHMT2 SNORA38 COL11A2 HCG24 PPT2-EGFL8 LOC102725068 CYP21A2 HLA-DOA HLA-DQB1-AS1 NOTCH4 STK19 MICB FKBPL HLA-DQA2 SAPCD1 PHF1 AGER RXRB TNF PRRC2A PSMB8 HLA-DPB2 HSPA1B TNXA PRRT1 C4B DAXX TAP1 MIR4646 HLA-DRB5 SKIV2L MIR3135B HLA-DOB APOM SNORD117 HLA-DRB1 HCP5 MIR5004 LY6G6D LY6G6E DDX39B-AS1 LY6G6F RGL2 C2-AS1 ZBTB12 SNORD84 NFKBIL1 ATP6V1G2 MSH5 HLA-DPB1 HCG26 C4A DDX39B LOC100507547 LTA SAPCD1-AS1 RPS18 HCG23 HLA-DMA DDAH2 HSD17B8 LY6G6C CFB SYNGAP1 SLC44A4 MIR6873
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DQA1 VARS BRD2 MIR219A1 MIR1236 LOC101929163 CLIC1 ZBTB9 MIR6832 LSM2 HLA-DMB TNXB ABHD16A CYP21A1P GPSM3 CUTA BTNL2 ATP6V1G2-DDX39B ZBTB22 SLC39A7 AGPAT1 HLA-DQB1 RNF5 C2 HLA-DQB2 HLA-DRA EGFL8 PSMB8-AS1 LST1 PBX2 PPT2 HLA-DRB6 GPANK1 MIR6834 C6orf25 NCR3 TAPBP RING1 VWA7 CSNK2B NELFE C6orf10 SNORD48 PPP1R2P1 AIF1 MCCD1 C6orf47 LOC100287329 LOC100294145 PFDN6 MSH5-SAPCD1 PSMB9 WDR46 KIFC1 TAP2 LY6G5C DXO NEU1 LY6G5B HCG25 ATF6B VPS52 HSPA1A MIR6833 LTB SNORD52 MIR6721 C6orf48 BAG6 HLA-DPA1 HSPA1L B3GALT4 EHMT2 SNORA38 COL11A2 HCG24 PPT2-EGFL8 LOC102725068 CYP21A2 HLA-DOA HLA-DQB1-AS1 NOTCH4 STK19 MICB FKBPL HLA-DQA2 SAPCD1 PHF1 AGER RXRB TNF PRRC2A PSMB8 HLA-DPB2 HSPA1B TNXA PRRT1 C4B DAXX TAP1 MIR4646 HLA-DRB5 SKIV2L MIR3135B HLA-DOB APOM SNORD117 HLA-DRB1 HCP5 MIR5004 LY6G6D LY6G6E DDX39B-AS1 LY6G6F RGL2 C2-AS1 ZBTB12 SNORD84 NFKBIL1 ATP6V1G2 MSH5 HLA-DPB1 HCG26 C4A DDX39B LOC100507547 LTA SAPCD1-AS1 RPS18 HCG23 HLA-DMA DDAH2 HSD17B8 LY6G6C CFB SYNGAP1 SLC44A4 MIR6873
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C6orf48 VARS BAG6 MIR1236 LOC101929163 CLIC1 MIR6832 HSPA1L LSM2 EHMT2 TNXB ABHD16A CYP21A1P GPSM3 SNORA38 PPT2-EGFL8 BTNL2 LOC102725068 CYP21A2 ATP6V1G2-DDX39B NOTCH4 STK19 MICB FKBPL SAPCD1 AGER MIR6891 TNF PRRC2A AGPAT1 RNF5 C2 HLA-DRA HSPA1B TNXA EGFL8 LST1 PRRT1 C4B PBX2 PPT2 MIR4646 SKIV2L GPANK1 C6orf25 NCR3 APOM SNORD117 HCP5 LY6G6D LY6G6E DDX39B-AS1 VWA7 LY6G6F CSNK2B NELFE C6orf10 C2-AS1 SNORD48 ZBTB12 AIF1 MCCD1 C6orf47 SNORD84 NFKBIL1 MICA ATP6V1G2 MSH5 HLA-B LOC100287329 MSH5-SAPCD1 LY6G5C HCG26 C4A DDX39B LOC100507547 DXO LTA SAPCD1-AS1 HCG23 NEU1 DDAH2 LY6G5B ATF6B LY6G6C CFB HSPA1A MIR6833 LTB SNORD52 SLC44A4 MIR6721
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion LY6G6E BAG6 LY6G5C PRRC2A LY6G5B LY6G6F CSNK2B MIR6832 ABHD16A AIF1 MIR4646 C6orf47 SNORA38 GPANK1 APOM
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss DDX39B-AS1 BAG6 CSNK2B MIR6832 ABHD16A AIF1 MCCD1 C6orf47 SNORA38 SNORD84 NFKBIL1 ATP6V1G2-DDX39B ATP6V1G2 LOC100287329 LY6G5C DDX39B LTA TNF PRRC2A LY6G5B LST1 LTB GPANK1 NCR3 APOM SNORD117

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