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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88806605 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02736239_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 7 1107 NP_112190.2
AB053172.1 7 1107 BAB61878.1
AF070552.1 5 646
AF321125.1 7 1078 AAG45181.1
BC000137.2 7 1069 AAH00137.2
BC008676.1 7 945 AAH08676.1
BC008860.2 7 1000 AAH08860.2
BC009410.1 7 1063 AAH09410.1
BC014202.2 3 368 AAH14202.2
BC021126.1 5 639
BC049205.1 5 711 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CTU2 CBFA2T3 TRAPPC2L LOC101927793 CDH15 CDT1 PIEZO1 ZNF778 LOC100289580 PABPN1L ACSF3 GALNS LOC339059 LOC100129697 APRT LOC400558 LINC00304 SLC22A31 LOC105371409 LOC107987238 MIR4722
nsv457617 Chr.16:88801844 - 88829729 on Build GRCh38 Gain GALNS APRT CDT1 LOC107987238
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain GALNS LOC339059 CTU2 APRT RNF166 CDT1 SNAI3-AS1 PIEZO1 SNAI3 LOC100289580 LOC107987238 MIR4722
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC100287036 CBFA2T3 ANKRD11 TRAPPC2L LOC101927793 CDH15 CDT1 PIEZO1 ZNF778 LOC100289580 PABPN1L ACSF3 LOC105371414 GALNS LOC339059 LOC100129697 APRT LOC400558 LINC00304 SLC22A31 LOC105371409 LOC107987238
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS LOC100129697 APRT CBFA2T3 TRAPPC2L LOC101927793 CDT1 LOC105371409 LOC107987238 PABPN1L
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss CBFA2T3 TRAPPC2L LOC101927793 CDH15 CDT1 PABPN1L ACSF3 GALNS LOC100129697 APRT LOC400558 LINC00304 LOC105371409 LOC107987238
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC100287036 MC1R CDT1 SNAI3 ZNF778 FAM157C TCF25 LOC100289580 VPS9D1-AS1 CPNE7 LOC100129697 IL17C DPEP1 URAHP AFG3L1P SNAI3-AS1 LOC101927817 ZNF276 CENPBD1 SPG7 CTU2 SPIRE2 DBNDD1 CDH15 LOC107984817 SNORD68 GALNS GAS8 TUBB3 CYBA GAS8-AS1 LOC105371409 TUBB8P7 RNF166 ANKRD11 TRAPPC2L LOC101927793 CHMP1A ACSF3 LOC105371414 LOC339059 APRT LOC400558 CDK10 DEF8 RPL13 SPATA2L CBFA2T3 MVD LOC105371419 FANCA PIEZO1 PABPN1L PRDM7 VPS9D1 LINC00304 SLC22A31 SPATA33 LOC107987238 MIR4722
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss GALNS APRT TRAPPC2L CDT1 PIEZO1 LOC107987238
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS LOC100129697 APRT CBFA2T3 TRAPPC2L LOC101927793 CDT1 LOC105371409 PIEZO1 LOC107987238 PABPN1L
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS APRT CBFA2T3 TRAPPC2L LOC101927793 CDT1 PIEZO1 LOC107987238 PABPN1L
nsv573715 Chr.16:88804814 - 88808224 on Build GRCh38 Loss CDT1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain CTU2 CBFA2T3 TRAPPC2L LOC101927793 CDT1 PIEZO1 LOC100289580 PABPN1L GALNS LOC339059 LOC100129697 APRT LOC105371409 LOC107987238 MIR4722
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1

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