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See other CDT1 CNV Assays ›
Gene Symbol
CDT1
Assay Reference Genome
Location

Chr.16:88808379 on build GRCh38
Cytoband
16q24.3
Assay ID Hs02747359_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 81620

Gene Name:

 chromatin licensing and DNA replication factor 1

Gene Aliases:

 DUP, RIS2

Location:

 Chr.16:88803778-88809258 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDT1 NM_030928.3 10 1796 NP_112190.2
AB053172.1 10 1796 BAB61878.1
AF070552.1 8 1335
AF321125.1 10 1767 AAG45181.1
BC000137.2 10 1758 AAH00137.2
BC008676.1 10 1634 AAH08676.1
BC008860.2 10 1689 AAH08860.2
BC009410.1 10 1752 AAH09410.1
BC014202.2 6 1057 AAH14202.2
BC021126.1 8 1328
BC049205.1 8 1400 AAH49205.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain CTU2 LOC400558 SLC22A31 CBFA2T3 ACSF3 LOC100129697 LINC00304 APRT PIEZO1 ZNF778 LOC107987238 CDH15 LOC339059 CDT1 TRAPPC2L PABPN1L LOC105371409 LOC101927793 MIR4722 GALNS LOC100289580
nsv457617 Chr.16:88801844 - 88829729 on Build GRCh38 Gain APRT GALNS LOC107987238 CDT1
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain CTU2 RNF166 APRT MIR4722 GALNS PIEZO1 SNAI3-AS1 LOC100289580 LOC107987238 SNAI3 LOC339059 CDT1
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC400558 SLC22A31 LOC105371414 CBFA2T3 ACSF3 LOC100129697 LINC00304 APRT PIEZO1 ZNF778 LOC107987238 CDH15 LOC339059 CDT1 TRAPPC2L PABPN1L LOC100287036 LOC105371409 LOC101927793 ANKRD11 GALNS LOC100289580
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion TRAPPC2L PABPN1L CBFA2T3 LOC105371409 LOC100129697 LOC101927793 APRT GALNS LOC107987238 CDT1
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC400558 CBFA2T3 ACSF3 LOC100129697 LINC00304 APRT LOC107987238 CDH15 CDT1 TRAPPC2L PABPN1L LOC105371409 LOC101927793 GALNS
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 LOC400558 LOC105371414 CBFA2T3 RNF166 ACSF3 LOC100129697 APRT ZNF778 CHMP1A CDT1 LOC100287036 GALNS CENPBD1 SPATA33 GAS8-AS1 SPATA2L TUBB8P7 CTU2 CDK10 SPIRE2 IL17C SNAI3 DPEP1 GAS8 ANKRD11 LOC101927817 LOC105371419 MVD SLC22A31 TUBB3 PRDM7 LOC107987238 LOC339059 MC1R TRAPPC2L URAHP CPNE7 LOC105371409 SPG7 LOC101927793 CYBA FANCA ZNF276 AFG3L1P LINC00304 PIEZO1 SNAI3-AS1 CDH15 LOC107984817 TCF25 PABPN1L VPS9D1 RPL13 MIR4722 VPS9D1-AS1 FAM157C LOC100289580 SNORD68 DBNDD1
nsv1063441 Chr.16:88767066 - 88861882 on Build GRCh38 Loss TRAPPC2L APRT GALNS PIEZO1 LOC107987238 CDT1
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss TRAPPC2L PABPN1L CBFA2T3 LOC105371409 LOC100129697 LOC101927793 APRT GALNS PIEZO1 LOC107987238 CDT1
nsv573718 Chr.16:88807259 - 88810716 on Build GRCh38 Loss APRT CDT1
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain TRAPPC2L PABPN1L CBFA2T3 LOC101927793 APRT GALNS PIEZO1 LOC107987238 CDT1
dgv5319n54 Chr.16:88804814 - 88809520 on Build GRCh38 Loss APRT CDT1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain CTU2 CBFA2T3 LOC100129697 APRT PIEZO1 LOC107987238 LOC339059 CDT1 TRAPPC2L PABPN1L LOC105371409 LOC101927793 MIR4722 GALNS LOC100289580
nsv573712 Chr.16:88796728 - 88809084 on Build GRCh38 Loss CDT1

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