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Gene Symbol
NME3
Assay Reference Genome
Location

Chr.16:1771732 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02768183_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4832

Gene Name:

 NME/NM23 nucleoside diphosphate kinase 3

Gene Aliases:

 DR-nm23, NDPK-C, NDPKC, NM23-H3, NM23H3, c371H6.2

Location:

 Chr.16:1770320-1771750 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NME3 NM_002513.2 NP_002504.2
XM_005255332.4 XP_005255389.1
XM_011522503.2 XP_011520805.1
XM_011522504.2 XP_011520806.1
BC000250.1 AAH00250.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MAPK8IP3 MIR3177 NUBP2 EME2 NME3 MRPS34 SPSB3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SSTR5-AS1 SNRNP25 ECI1 NTN3 CACNA1H PRSS27 TPSG1 SPSB3 CLCN7 HBZ STUB1 MSRB1 RPS2 IFT140 WFIKKN1 MIR6768 TBL3 HS3ST6 MCRIP2 TPSB2 METTL26 TSC2 LOC100287175 LOC105371046 CCDC154 CCNF RNF151 RAB40C MIR4516 LOC105371038 MPG LUC7L CRAMP1 PTX4 MIR1225 IGFALS PIGQ LOC107984876 TMEM8A PRSS29P PKD1 WASIR2 MLST8 MIR3180-5 SSTR5 GNG13 PRR25 SNORA10 RPL23AP5 MEIOB MIR4717 CASKIN1 ABCA3 MIR6767 MSLN MIR662 ARHGDIG SNORA64 NME4 LOC729652 PDPK1 UBE2I CHTF18 SNHG19 FLJ42627 MRPS34 SLC9A3R2 TMEM204 RHOT2 TPSAB1 MRPL28 PGP MIR940 NTHL1 MIR5587 LOC105371047 E4F1 NDUFB10 PRR35 CEMP1 MIR3178 HBQ1 ABCA17P LOC105371049 RHBDF1 LINC00235 GNPTG ERVK13-1 MIR6511B1 LINC00254 SYNGR3 METRN DNASE1L2 FAHD1 LMF1-AS1 HN1L ZNF598 CCDC78 SNORD60 ATP6V0C NOXO1 TELO2 POLR3K HBA1 WDR90 NARFL NHLRC4 TBC1D24 WDR24 EME2 RPL3L LOC105371045 C16orf91 RAB26 LOC652276 NUBP2 TRAF7 RAB11FIP3 BAIAP3 LOC101929280 AMDHD2 LOC100134368 BRICD5 HAGH KCTD5 SOX8 FAM234A LOC107987233 MAPK8IP3 SNHG9 RHBDL1 MIR6859-4 FAM173A PDIA2 NME3 MIR3677 CAPN15 DDX11L10 UNKL RGS11 MIR3177 MIR3176 SNORA78 C1QTNF8 HAGHL JMJD8 GFER TSR3 RNPS1 LMF1 LOC105371184 RPUSD1 DECR2 NPRL3 C16orf59 TPSD1 AXIN1 HBM LOC106660606 HBA2 NPW FBXL16
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss MAPK8IP3 EME2 NME3 MRPS34 SPSB3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MAPK8IP3 MIR3177 NUBP2 EME2 IGFALS NME3 MRPS34 SPSB3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MAPK8IP3 NUBP2 EME2 IGFALS NME3 MRPS34 SPSB3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss HAGH MIR3177 LOC105371046 EME2 MRPS34 SPSB3 MAPK8IP3 HN1L IFT140 CRAMP1 NUBP2 IGFALS NME3
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MAPK8IP3 NUBP2 EME2 IGFALS NME3 MRPS34 SPSB3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss HAGH MIR3177 LOC105371046 EME2 MRPS34 SPSB3 MAPK8IP3 FAHD1 HN1L TMEM204 IFT140 CRAMP1 NUBP2 MEIOB LOC105371047 IGFALS NME3 TELO2
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MAPK8IP3 NUBP2 EME2 IGFALS NME3 MRPS34 SPSB3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss HAGH MIR3177 EME2 MRPS34 SPSB3 MAPK8IP3 FAHD1 HN1L CRAMP1 NUBP2 MEIOB IGFALS NME3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MAPK8IP3 EME2 NME3 MRPS34 SPSB3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion HAGH MAPK8IP3 FAHD1 MIR3177 NUBP2 EME2 IGFALS NME3 MRPS34 SPSB3
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MAPK8IP3 NUBP2 EME2 IGFALS NME3 MRPS34 SPSB3

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More Information


Additional Information:

For this assay, SNP(s) [rs574721671] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

kinase

Gene Ontology Categories:

Function(s) Process(es)


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