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See other TTLL10 CNV Assays ›
Gene Symbol
TTLL10
Assay Reference Genome
Location

Chr.1:1182324 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02780924_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 254173

Gene Name:

 tubulin tyrosine ligase like 10

Gene Aliases:

 TTLL5

Location:

 Chr.1:1173709-1197936 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TTLL10 NM_001130045.1 NP_001123517.1
NM_153254.2 NP_694986.2
XM_005244738.1 XP_005244795.1
XM_011541177.2 XP_011539479.1
XM_017000906.1 XP_016856395.1
XM_017000907.1 XP_016856396.1
XM_017000908.1 XP_016856397.1
XM_017000909.1 XP_016856398.1
XM_017000910.1 XP_016856399.1
XM_017000911.1 XP_016856400.1
XM_017000912.1 XP_016856401.1
AK093438.1 BAC04164.1
AK124125.1 BAC85781.1
BC126152.1
BC126154.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss CPTP LOC107984841 MIR200A FAM132A MIR6726 FAM87B TAS1R3 TTLL10 UBE2J2 CFAP74 LOC107985728 MTND2P28 LINC00115 PUSL1 MIR1302-2 KLHL17 MIR6859-1 GNB1 SLC35E2 TMEM52 FAM138A SKI MRPL20 CPSF3L LOC729737 FNDC10 SAMD11 HES4 TNFRSF18 B3GALT6 AURKAIP1 SLC35E2B DDX11L1 SSU72 MMP23A LOC105378948 LOC100506504 LOC100130417 MIR6808 LOC100129534 CALML6 MIR429 DVL1 ANKRD65 LINC01128 LOC107985729 LOC101928626 LOC100133331 NOC2L SCNN1D AGRN MMP23B CDK11A VWA1 GABRD FAAP20 MIR6859-2 MIB2 LOC105378591 LOC105378589 FAM41C MXRA8 CCNL2 LOC100134822 OR4F5 ISG15 LOC105378949 MIR200B ATAD3C PRKCZ OR4F29 LOC102724312 NADK MTND1P23 TMEM88B PLEKHN1 LOC148413 LOC100288175 LINC01342 LOC284600 WASH7P LOC100287934 RNF223 OR4F16 C1orf159 ATAD3A LOC100132287 LOC105378592 PERM1 LOC102725121 ACAP3 MIR6727 TNFRSF4 TTLL10-AS1 ATAD3B LOC105378947 LOC100288069 SDF4 TMEM240 CDK11B MORN1 MIR6723
nsv544954 Chr.1:1139244 - 1186414 on Build GRCh38 Loss TTLL10 MIR429 MIR200A LINC01342 TTLL10-AS1 MIR200B
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TTLL10 MIR429 MIR200A LINC01342 UBE2J2 TTLL10-AS1 RNF223 FAM132A C1orf159 SCNN1D SDF4 TNFRSF18 B3GALT6 LOC105378948 TNFRSF4 MIR200B
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TTLL10 MIR429 MIR200A LINC01342 UBE2J2 TTLL10-AS1 RNF223 FAM132A C1orf159 SCNN1D MIR6726 SDF4 TNFRSF18 B3GALT6 ACAP3 TNFRSF4 MIR200B
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TTLL10 SDF4 TNFRSF18 B3GALT6 TTLL10-AS1 TNFRSF4
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR200A LOC100288175 LINC01342 LOC284600 RNF223 C1orf159 SAMD11 HES4 TNFRSF18 FAM41C PERM1 LOC105378948 ISG15 LOC100130417 TNFRSF4 MIR200B TTLL10 MIR429 TTLL10-AS1 LOC107985728 NOC2L AGRN SDF4 KLHL17 PLEKHN1
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication CPTP MIR200A LOC100288175 LINC01342 RNF223 FAM132A CPSF3L C1orf159 MIR6726 TNFRSF18 B3GALT6 LOC105378948 ACAP3 MIR6727 TAS1R3 TNFRSF4 MIR200B TTLL10 MIR429 UBE2J2 TTLL10-AS1 SCNN1D PUSL1 AGRN SDF4
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss CPTP MIR200A FAM132A MIB2 MIR6726 FAM41C FAM87B MXRA8 CCNL2 ISG15 TAS1R3 MIR200B ATAD3C TTLL10 UBE2J2 LOC102724312 LOC107985728 LINC00115 PUSL1 KLHL17 NADK TMEM88B SLC35E2 PLEKHN1 LOC148413 LOC100288175 LINC01342 LOC284600 MRPL20 LOC100287934 RNF223 CPSF3L C1orf159 ATAD3A FNDC10 SAMD11 HES4 TNFRSF18 PERM1 B3GALT6 AURKAIP1 SLC35E2B SSU72 MMP23A LOC105378948 ACAP3 LOC100130417 MIR6727 MIR6808 TNFRSF4 MIR429 DVL1 ANKRD65 TTLL10-AS1 ATAD3B LINC01128 LOC107985729 NOC2L SCNN1D AGRN LOC100288069 SDF4 MMP23B CDK11A VWA1 TMEM240 CDK11B
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR200A LOC100288175 LINC01342 LOC284600 RNF223 FAM132A C1orf159 SAMD11 HES4 TNFRSF18 FAM41C PERM1 B3GALT6 FAM87B LOC105378948 ISG15 LOC100130417 TNFRSF4 MIR200B TTLL10 MIR429 UBE2J2 TTLL10-AS1 LINC01128 LOC107985728 NOC2L LINC00115 AGRN SDF4 KLHL17 PLEKHN1
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion CPTP LOC148413 MIR200A LINC01342 MRPL20 FAM132A MIB2 CPSF3L C1orf159 ATAD3A FNDC10 MIR6726 TNFRSF18 B3GALT6 AURKAIP1 SSU72 MXRA8 CCNL2 ACAP3 MIR6727 TAS1R3 MIR6808 TNFRSF4 MIR200B ATAD3C TTLL10 MIR429 DVL1 ANKRD65 UBE2J2 TTLL10-AS1 ATAD3B LOC102724312 LOC107985729 SCNN1D PUSL1 SDF4 MMP23B VWA1 TMEM240 TMEM88B CDK11B
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain CPTP LOC148413 MIR200A LOC100288175 LINC01342 LOC284600 MRPL20 RNF223 FAM132A CPSF3L C1orf159 SAMD11 MIR6726 HES4 TNFRSF18 PERM1 B3GALT6 AURKAIP1 MXRA8 CCNL2 LOC105378948 ACAP3 ISG15 LOC100130417 MIR6727 TAS1R3 MIR6808 TNFRSF4 MIR200B TTLL10 MIR429 DVL1 ANKRD65 UBE2J2 TTLL10-AS1 LOC107985728 NOC2L SCNN1D PUSL1 AGRN SDF4 KLHL17 TMEM88B PLEKHN1
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10 MIR429 MIR200A LOC100288175 LINC01342 TTLL10-AS1 RNF223 NOC2L C1orf159 SAMD11 AGRN SDF4 HES4 TNFRSF18 KLHL17 PERM1 LOC105378948 ISG15 TNFRSF4 MIR200B PLEKHN1
nsv509257 Chr.1:1151955 - 1189470 on Build GRCh38 Insertion TTLL10 MIR429 MIR200A TTLL10-AS1 MIR200B
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TTLL10 MIR429 MIR200A UBE2J2 TTLL10-AS1 FAM132A CPSF3L SCNN1D PUSL1 MIR6726 SDF4 TNFRSF18 B3GALT6 ACAP3 MIR6727 TNFRSF4 MIR200B

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More Information


Additional Information:

For this assay, SNP(s) [rs112895009] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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