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See other BAG6 CNV Assays ›
Gene Symbol
BAG6
Assay Reference Genome
Location

Chr.6:31658976 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02792407_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7917

Gene Name:

 BCL2 associated athanogene 6

Gene Aliases:

 BAG-6, BAT3, D6S52E, G3

Location:

 Chr.6:31639028-31660900 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BAG6 XM_017011279.1 XP_016866768.1

Target Gene Details

Entrez Gene ID:

 57827

Gene Name:

 chromosome 6 open reading frame 47

Gene Aliases:

 D6S53E, G4, NG34

Location:

 Chr.6:31658298-31660772 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C6orf47 NM_021184.3 1 1797 NP_067007.3
AJ245433.1 1 1758 CAB51603.1
AK315349.1
BC012950.1 1 1797 AAH12950.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LSM2 HLA-DRB1 MICB HCG23 NEU1 PBX2 LY6G5B HLA-DRB5 NFKBIL1 C4A HSPA1A TNF C2 VARS SNORD48 LOC102725068 LOC100507547 SKIV2L GPSM3 GPANK1 SLC44A4 VWA7 C6orf10 HLA-DRB6 MCCD1 LY6G5C STK19 HCG26 SAPCD1-AS1 ZBTB12 ATP6V1G2-DDX39B AGER PRRC2A C6orf47 MIR6721 APOM LY6G6E C4B NELFE EHMT2 ATP6V1G2 ATF6B SNORD117 TNXB LTB SNORA38 TNXA BAG6 HSPA1B MIR6832 CLIC1 CFB HLA-DRA CYP21A2 ABHD16A LY6G6D BTNL2 AIF1 PPT2-EGFL8 PRRT1 MIR6833 LY6G6C LOC100287329 CYP21A1P PPT2 C6orf48 LST1 SNORD52 FKBPL C6orf25 MSH5-SAPCD1 CSNK2B HCP5 DDAH2 LOC101929163 NCR3 EGFL8 C2-AS1 MSH5 DXO LY6G6F HSPA1L SAPCD1 MIR1236 SNORD84 DDX39B-AS1 MIR4646 LTA RNF5 DDX39B AGPAT1 NOTCH4
nsv601942 Chr.6:31607499 - 31664357 on Build GRCh38 Loss AIF1 PRRC2A C6orf47 SNORA38 BAG6 APOM MIR6832 GPANK1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LSM2 MICB NEU1 LY6G5B NFKBIL1 C4A HSPA1A TNF MIR6891 C2 VARS SNORD48 LOC102725068 SKIV2L GPANK1 SLC44A4 VWA7 MCCD1 LY6G5C STK19 HCG26 SAPCD1-AS1 ZBTB12 ATP6V1G2-DDX39B PRRC2A C6orf47 APOM LY6G6E C4B NELFE EHMT2 ATP6V1G2 SNORD117 TNXB LTB SNORA38 TNXA BAG6 HSPA1B MIR6832 CLIC1 CFB CYP21A2 HLA-B ABHD16A LY6G6D AIF1 LY6G6C LOC100287329 CYP21A1P C6orf48 LST1 SNORD52 C6orf25 MSH5-SAPCD1 CSNK2B HCP5 DDAH2 NCR3 C2-AS1 MSH5 MICA DXO LY6G6F HSPA1L SAPCD1 MIR1236 SNORD84 DDX39B-AS1 MIR4646 LTA DDX39B
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LSM2 HLA-DRB1 MICB CUTA TAP1 NEU1 HLA-DRB5 NFKBIL1 BRD2 HSPA1A C2 VARS LOC100507547 HLA-DOA GPSM3 HLA-DPB1 SLC44A4 HLA-DQB2 VWA7 HLA-DRB6 B3GALT4 MCCD1 LY6G5C HCG26 HLA-DQB1-AS1 ZBTB12 VPS52 AGER PRRC2A C6orf47 LY6G6E C4B EHMT2 MIR6834 PSMB8 TNXB SNORA38 HLA-DMA PPP1R2P1 TNXA RGL2 MIR6832 CLIC1 CFB LY6G6D HLA-DMB PRRT1 MIR6833 LY6G6C LOC100287329 CYP21A1P ZBTB22 COL11A2 SNORD52 MSH5-SAPCD1 CSNK2B HLA-DOB LOC101929163 EGFL8 C2-AS1 LY6G6F MIR1236 SNORD84 MIR4646 LTA RNF5 NOTCH4 TAP2 HLA-DQA2 HCG23 PHF1 MIR6873 PBX2 LY6G5B HCG25 C4A TNF SNORD48 RPS18 LOC102725068 SKIV2L ZBTB9 GPANK1 RING1 C6orf10 KIFC1 PSMB9 PFDN6 LOC100294145 HLA-DPA1 HLA-DQB1 HSD17B8 STK19 SAPCD1-AS1 ATP6V1G2-DDX39B MIR3135B MIR6721 APOM TAPBP NELFE ATP6V1G2 ATF6B WDR46 SNORD117 LTB SYNGAP1 BAG6 HSPA1B HLA-DRA MIR5004 CYP21A2 ABHD16A BTNL2 AIF1 PPT2-EGFL8 HCG24 PPT2 HLA-DPB2 C6orf48 LST1 FKBPL C6orf25 HCP5 MIR219A1 DDAH2 PSMB8-AS1 RXRB NCR3 HLA-DQA1 MSH5 DXO SLC39A7 HSPA1L SAPCD1 DAXX DDX39B-AS1 DDX39B AGPAT1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LSM2 HLA-DRB1 MICB CUTA TAP1 NEU1 HLA-DRB5 NFKBIL1 BRD2 HSPA1A C2 VARS LOC100507547 HLA-DOA GPSM3 HLA-DPB1 SLC44A4 HLA-DQB2 VWA7 HLA-DRB6 B3GALT4 MCCD1 LY6G5C HCG26 HLA-DQB1-AS1 ZBTB12 VPS52 AGER PRRC2A C6orf47 LY6G6E C4B EHMT2 MIR6834 PSMB8 TNXB SNORA38 HLA-DMA PPP1R2P1 TNXA RGL2 MIR6832 CLIC1 CFB LY6G6D HLA-DMB PRRT1 MIR6833 LY6G6C LOC100287329 CYP21A1P ZBTB22 COL11A2 SNORD52 MSH5-SAPCD1 CSNK2B HLA-DOB LOC101929163 EGFL8 C2-AS1 LY6G6F MIR1236 SNORD84 MIR4646 LTA RNF5 NOTCH4 TAP2 HLA-DQA2 HCG23 PHF1 MIR6873 PBX2 LY6G5B HCG25 C4A TNF SNORD48 RPS18 LOC102725068 SKIV2L ZBTB9 GPANK1 RING1 C6orf10 KIFC1 PSMB9 PFDN6 LOC100294145 HLA-DPA1 HLA-DQB1 HSD17B8 STK19 SAPCD1-AS1 ATP6V1G2-DDX39B MIR3135B MIR6721 APOM TAPBP NELFE ATP6V1G2 ATF6B WDR46 SNORD117 LTB SYNGAP1 BAG6 HSPA1B HLA-DRA MIR5004 CYP21A2 ABHD16A BTNL2 AIF1 PPT2-EGFL8 HCG24 PPT2 HLA-DPB2 C6orf48 LST1 FKBPL C6orf25 HCP5 MIR219A1 DDAH2 PSMB8-AS1 RXRB NCR3 HLA-DQA1 MSH5 DXO SLC39A7 HSPA1L SAPCD1 DAXX DDX39B-AS1 DDX39B AGPAT1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LSM2 MICB HCG23 NEU1 PBX2 LY6G5B NFKBIL1 C4A HSPA1A TNF MIR6891 C2 VARS SNORD48 LOC102725068 LOC100507547 SKIV2L GPSM3 GPANK1 SLC44A4 VWA7 C6orf10 MCCD1 LY6G5C STK19 HCG26 SAPCD1-AS1 ZBTB12 ATP6V1G2-DDX39B AGER PRRC2A C6orf47 MIR6721 APOM LY6G6E C4B NELFE EHMT2 ATP6V1G2 ATF6B SNORD117 TNXB LTB SNORA38 TNXA BAG6 HSPA1B MIR6832 CLIC1 CFB HLA-DRA CYP21A2 HLA-B ABHD16A LY6G6D BTNL2 AIF1 PPT2-EGFL8 PRRT1 MIR6833 LY6G6C LOC100287329 CYP21A1P PPT2 C6orf48 LST1 SNORD52 FKBPL C6orf25 MSH5-SAPCD1 CSNK2B HCP5 DDAH2 LOC101929163 NCR3 EGFL8 C2-AS1 MSH5 MICA DXO LY6G6F HSPA1L SAPCD1 MIR1236 SNORD84 DDX39B-AS1 MIR4646 LTA RNF5 DDX39B AGPAT1 NOTCH4
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion CSNK2B SNORA38 LY6G5B BAG6 MIR6832 LY6G5C ABHD16A LY6G6F AIF1 PRRC2A C6orf47 MIR4646 APOM LY6G6E GPANK1
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss ATP6V1G2 SNORD117 LTB SNORA38 LY6G5B NFKBIL1 BAG6 TNF MIR6832 ABHD16A AIF1 LOC100287329 GPANK1 LST1 CSNK2B MCCD1 NCR3 LY6G5C ATP6V1G2-DDX39B SNORD84 DDX39B-AS1 PRRC2A C6orf47 LTA APOM DDX39B

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