Hs02806087_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67880621 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Within Exon 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4	18	2401	NP_055144.3
	AK128582.1	17	2875
	AK291049.1	18	2169
	BC043616.1	18	2304	AAH43616.1
	BC053598.1	13	1541	AAH53598.1
	BC064567.1	18	2298	AAH64567.1
	L26339.1	18	2298	AAA21833.1
	U17474.1	8	938	AAB51444.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	PLEKHG4 CARMIL2 NOL3 CTRL ACD DPEP3 EDC4 AGRP PARD6A MIR328 ATP6V0D1 DPEP2 LOC100505942 LOC100131303 FBXL8 LRRC29 FHOD1 LOC105369155 LOC107984813 NUTF2 TRADD SLC9A5 LCAT KIAA0895L HSD11B2 ENKD1 EXOC3L1 THAP11 NRN1L CENPT GFOD2 TSNAXIP1 DUS2 RANBP10 CTCF ELMO3 ZDHHC1 FAM65A E2F4 TPPP3 PSMB10 PSKH1 DDX28 HSF4 KCTD19 C16orf86 SLC12A4 LRRC36 TMEM208
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	NRN1L NUTF2 PSKH1 EDC4
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	PLEKHG4 CARMIL2 NOL3 CTRL ACD DPEP3 EDC4 AGRP PARD6A MIR328 ATP6V0D1 DPEP2 LOC100505942 LOC100131303 FBXL8 LRRC29 B3GNT9 FHOD1 LOC105369155 LOC107984813 NUTF2 TRADD SLC9A5 LCAT C16orf70 KIAA0895L HSD11B2 ENKD1 EXOC3L1 THAP11 NRN1L CENPT GFOD2 TSNAXIP1 DUS2 RANBP10 CTCF ELMO3 ZDHHC1 FAM65A E2F4 TPPP3 PSMB10 PSKH1 DDX28 HSF4 KCTD19 C16orf86 SLC12A4 LRRC36 TMEM208

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding