Hs02852321_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48039242 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	ELSPBP1 CABP5 PLA2G4C C19orf68 BSPH1 LIG1 PLA2G4C-AS1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	ZNF114 CABP5 RRAS DKKL1 PLA2G4C-AS1 SNAR-C4 SNAR-G2 RPL18 LOC100287477 BAX HSD17B14 FLT3LG SNORD35B SNORD34 CGB5 CCDC114 GFY SNAR-C5 C19orf73 FGF21 SNAR-A13 SNAR-A4 IRF3 CD37 SLC6A16 SNAR-A1 SNORD32A TULP2 MIR4324 LIG1 RCN3 TEAD2 RASIP1 NOSIP SEC1P CGB7 KCNJ14 KCNA7 SNAR-A11 GRIN2D SNAR-B1 SCAF1 PLA2G4C SNAR-A8 PRR12 RUVBL2 RPS11 LOC105372430 CYTH2 LMTK3 PPFIA3 FCGRT LIN7B MIR5088 ELSPBP1 CARD8-AS1 ADM5 NTF4 KDELR1 PTOV1 SNAR-B2 LHB AKT1S1 PNKP DBP LOC101059948 NUCB1-AS1 PPP1R15A MIR6799 SNAR-A10 EMP3 PLEKHA4 IL4I1 CPT1C SIGLEC11 SNAR-A6 SNAR-D SNAR-A9 C19orf68 CGB1 SNAR-C1 NTN5 CGB2 PIH1D1 FUZ SYNGR4 CGB3 SIGLEC16 SNORD33 ZNF473 SNAR-C3 MIR4749 SLC17A7 HRC AP2A1 MIR6800 TMEM143 SNAR-A5 BSPH1 PTOV1-AS1 DHDH TSKS SNAR-A2 FTL RPL13A FUT1 MIR150 SNAR-C2 MIR4751 SNORD35A SNRNP70 ALDH16A1 MIR6798 FLJ26850 BCL2L12 CARD8 MAMSTR CA11 SPHK2 SULT2B1 BCAT2 TRPM4 NUP62 LOC101928295 GYS1 LOC105447645 SNAR-A3 SNAR-A7 PRMT1 PTH2 SNAR-A14 MED25 IZUMO1 CGB8 VRK3 PRRG2 TBC1D17 MIR4750 FAM83E NUCB1 SPACA4 ATF5 PTOV1-AS2 SNAR-G1 SNAR-A12 CCDC155 FUT2 GRWD1
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	ZNF114 EMP3 ELSPBP1 CARD8-AS1 CABP5 TMEM143 CARD8 C19orf68 KDELR1 GRIN2D PLA2G4C-AS1 PLA2G4C SYNGR4 LIG1 CCDC114
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	ELSPBP1 CABP5 SNAR-C5 SNAR-A13 BSPH1 CRX SNAR-C1 SNAR-C4 SNAR-A1 SULT2A1 SNAR-A3 SNAR-A2 SNAR-C2 SNAR-A12 LINC01595 SNAR-C3 TPRX1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 CABP5 PLA2G4C PLA2G4C-AS1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	ELSPBP1 CABP5 SNAR-C5 SNAR-A13 BSPH1 CRX SNAR-C1 PLA2G4C-AS1 SNAR-C4 SNAR-A1 SULT2A1 SNAR-A3 SNAR-A2 PLA2G4C SNAR-C2 SNAR-A12 LINC01595 SNAR-C3 TPRX1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding