Hs02852321_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48039242 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 PLA2G4C C19orf68 BSPH1 CABP5 PLA2G4C-AS1 ELSPBP1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNORD33 DKKL1 FUT2 SNAR-C2 ZNF473 KCNA7 MED25 SNAR-D SNAR-A13 AKT1S1 NUCB1-AS1 NUCB1 RRAS PPFIA3 TMEM143 CGB1 SPACA4 FTL MIR6798 CPT1C PTOV1 LOC101928295 SIGLEC11 BCAT2 CGB3 SNAR-A1 BSPH1 MIR5088 TBC1D17 PLA2G4C-AS1 DHDH NTF4 PTH2 ADM5 MIR6800 CGB5 CARD8 NOSIP C19orf68 LOC101059948 RCN3 HSD17B14 SNORD34 FAM83E SNAR-C5 MIR4750 GYS1 AP2A1 PTOV1-AS1 MIR4749 FGF21 CARD8-AS1 PRR12 SNAR-A4 SNAR-B2 TULP2 SNAR-A7 PPP1R15A FLJ26850 CYTH2 RPS11 LIG1 SNAR-C1 PNKP MIR4751 MIR150 KDELR1 PTOV1-AS2 HRC SPHK2 SNAR-C4 GRWD1 SNAR-A11 SNAR-C3 PRMT1 SNAR-A6 SNORD35B LMTK3 CGB2 SYNGR4 DBP SNAR-G2 CABP5 NUP62 EMP3 FLT3LG RASIP1 SNAR-A9 SULT2B1 BAX SNORD32A FCGRT KCNJ14 ZNF114 NTN5 GFY SIGLEC16 PIH1D1 CD37 SEC1P ALDH16A1 CGB8 TSKS LIN7B TRPM4 SNAR-A2 MIR4324 SNAR-G1 PRRG2 PLEKHA4 SCAF1 MIR6799 SLC17A7 CCDC155 IL4I1 SNAR-A14 SNAR-A3 LOC105372430 LOC100287477 SNRNP70 CCDC114 SNAR-B1 FUT1 C19orf73 CA11 SNAR-A5 GRIN2D ELSPBP1 RUVBL2 PLA2G4C SNORD35A BCL2L12 SNAR-A8 LHB SNAR-A10 FUZ RPL18 SLC6A16 MAMSTR ATF5 VRK3 IZUMO1 RPL13A CGB7 IRF3 SNAR-A12 TEAD2 LOC105447645
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8 LIG1 PLA2G4C SYNGR4 C19orf68 KDELR1 CABP5 PLA2G4C-AS1 EMP3 CCDC114 TMEM143 CARD8-AS1 ZNF114 GRIN2D ELSPBP1
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-C1 SNAR-A1 SNAR-C2 BSPH1 SNAR-C5 CABP5 CRX LINC01595 SNAR-A13 SNAR-A3 SNAR-A2 SNAR-C4 TPRX1 SULT2A1 SNAR-A12 SNAR-C3 ELSPBP1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C CABP5 PLA2G4C-AS1 ELSPBP1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	PLA2G4C SNAR-C1 SNAR-A1 SNAR-C2 BSPH1 SNAR-C5 CABP5 CRX PLA2G4C-AS1 LINC01595 SNAR-A13 SNAR-A3 SNAR-A2 SNAR-C4 TPRX1 SULT2A1 SNAR-A12 SNAR-C3 ELSPBP1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding