Hs02871271_cn

• Gene Symbol: SCAMP4
• Assay Reference Genome Location: Chr.19:1918162 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 113178
• Gene Name: secretory carrier membrane protein 4
• Gene Aliases: SCAMP-4
• Location: Chr.19:1905374-1926013 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCAMP4	NM_079834.2			NP_524558.1
	AK074586.1			BAC11075.1
	AK074967.1			BAC11322.1
	AK092056.1			BAC03797.1
	AK307641.1
	AK307700.1
	AL832731.1
	BC011747.2			AAH11747.1
	BC016509.1			AAH16509.1
	BC062598.1			AAH62598.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	AP3D1 MOB3A ADAT3 IZUMO4 ATP8B3 KLF16 MKNK2 ABHD17A ONECUT3 LOC100288123 CSNK1G2 REXO1 BTBD2 MIR1909 CSNK1G2-AS1 SCAMP4
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	RPS15 GAMT TCF3 KLF16 MEX3D ONECUT3 LOC100288123 BTBD2 DAZAP1 REEP6 MUM1 MIR1909 CSNK1G2-AS1 PCSK4 APC2 ADAT3 PLK5 ATP8B3 ABHD17A NDUFS7 CSNK1G2 REXO1 UQCR11 MBD3 C19orf25 ADAMTSL5 SCAMP4
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	MOB3A ADAT3 IZUMO4 ATP8B3 KLF16 MKNK2 ABHD17A LOC100288123 CSNK1G2 REXO1 BTBD2 MIR1909 CSNK1G2-AS1 SCAMP4
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	RPS15 GAMT TCF3 KLF16 MEX3D MKNK2 ONECUT3 LOC100288123 BTBD2 DAZAP1 REEP6 MUM1 MIR1909 CSNK1G2-AS1 PCSK4 APC2 ADAT3 PLK5 ATP8B3 ABHD17A NDUFS7 CSNK1G2 REXO1 UQCR11 MBD3 C19orf25 ADAMTSL5 SCAMP4
nsv1160561	Chr.19:1884553 - 2003982 on Build GRCh38	Deletion	CSNK1G2 BTBD2 ADAT3 CSNK1G2-AS1 ABHD17A SCAMP4

More Information

Additional Information:

For this assay, SNP(s) [rs116594971] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transfer/carrier protein

Gene Ontology Categories:

Process(es)

protein transport