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See other POLR2E CNV Assays ›
Gene Symbol
POLR2E
Assay Reference Genome
Location

Chr.19:1088227 on build GRCh38
Cytoband
19p13.3
Assay ID Hs02879159_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5434

Gene Name:

 RNA polymerase II subunit E

Gene Aliases:

 RPABC1, RPB5, XAP4, hRPB25, hsRPB5

Location:

 Chr.19:1086579-1095392 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POLR2E NM_001316323.1 7 1043 NP_001303252.1
NM_001316324.1 8 1191 NP_001303253.1
NM_002695.3 8 1218 NP_002686.2
XM_011528070.2 8 1216 XP_011526372.1
XM_017026883.1 7 1035 XP_016882372.1
AK122813.1
BC004441.1 AAH04441.1
BC034144.1 8 1183 AAH34144.1
D38251.1 BAA07406.1
J04965.1 AAA62401.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1058677 Chr.19:1054061 - 1283189 on Build GRCh38 Loss MIDN STK11 CIRBP-AS1 ATP5D GPX4 EFNA2 ABCA7 POLR2E CIRBP SBNO2 ARHGAP45 C19orf24 LOC102725180 CBARP
nsv9662 Chr.19:893394 - 1317740 on Build GRCh38 Gain MIDN STK11 CIRBP-AS1 TMEM259 ATP5D GPX4 KISS1R GRIN3B ARID3A EFNA2 ABCA7 POLR2E CIRBP SBNO2 ARHGAP45 LOC105372235 C19orf24 LOC102725180 RNU6-2 RNU6-9 CBARP R3HDM4 WDR18 CNN2
dgv136n111 Chr.19:1038223 - 1329640 on Build GRCh38 Deletion MIDN STK11 CIRBP-AS1 ATP5D GPX4 EFNA2 ABCA7 POLR2E CIRBP SBNO2 ARHGAP45 C19orf24 LOC102725180 CBARP CNN2
nsv1160555 Chr.19:887275 - 1346084 on Build GRCh38 Deletion STK11 TMEM259 ATP5D KISS1R GRIN3B EFNA2 POLR2E SBNO2 LOC105372235 C19orf24 RNU6-9 MIDN CIRBP-AS1 GPX4 ARID3A ABCA7 CIRBP ARHGAP45 MED16 LOC102725180 RNU6-2 CBARP R3HDM4 WDR18 CNN2
nsv470102 Chr.19:1046521 - 1152656 on Build GRCh38 Loss ABCA7 POLR2E SBNO2 ARHGAP45 GPX4
nsv469845 Chr.19:951640 - 1144486 on Build GRCh38 Loss ABCA7 POLR2E TMEM259 SBNO2 ARHGAP45 LOC105372235 RNU6-2 GPX4 GRIN3B WDR18 CNN2 ARID3A
nsv833704 Chr.19:951641 - 1144486 on Build GRCh38 Gain ABCA7 POLR2E TMEM259 SBNO2 ARHGAP45 LOC105372235 RNU6-2 GPX4 GRIN3B WDR18 CNN2 ARID3A
nsv470103 Chr.19:1086044 - 1325151 on Build GRCh38 Gain MIDN STK11 CIRBP-AS1 ATP5D GPX4 EFNA2 POLR2E CIRBP SBNO2 ARHGAP45 C19orf24 LOC102725180 CBARP
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion GZMM PRSS57 TMEM259 SHC2 AZU1 CFD KISS1R GRIN3B POLRMT MADCAM1 RNF126 CDC34 HCN2 BSG POLR2E FSTL3 LOC105372235 RNU6-9 PTBP1 PLPPR3 GPX4 FGF22 C2CD4C ARID3A TPGS1 ABCA7 MIR3187 PALM THEG MIR4745 ARHGAP45 MED16 RNU6-2 PRTN3 ODF3L2 LOC101928450 ELANE R3HDM4 WDR18 MISP CNN2
dgv135n111 Chr.19:1014378 - 1156398 on Build GRCh38 Deletion ABCA7 POLR2E TMEM259 SBNO2 ARHGAP45 RNU6-2 GPX4 CNN2

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