Hs02887206_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41574752 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3			NP_055275.1
	AB027011.1			BAA84704.1
	AK313407.1
	AL834417.1			CAD39079.2
	CR456457.1			CAG30343.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	PMM1 MIR6889 POLR3H LOC100996598 TOB2 ZC3H7B LOC105373044 RANGAP1 ACO2 PHF5A CSDC2 TEF
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	PMM1 XRCC6 POLR3H LOC105373044 DESI1 CSDC2
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	PMM1 XRCC6 SNU13 DESI1 CSDC2 C22orf46 MEI1
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	PMM1 XRCC6 LOC100996598 SNORD140 ZC3H7B LOC105373044 RANGAP1 DESI1 ACO2 PHF5A MIR1281 CSDC2 C22orf46 MEI1 TEF EP300 EP300-AS1 MIR6889 POLR3H TOB2 CHADL SNU13 L3MBTL2
nsv3639	Chr.22:41571809 - 41602871 on Build GRCh38	Insertion	PMM1 DESI1 CSDC2
esv3647800	Chr.22:41574227 - 41593225 on Build GRCh38	Gain	PMM1 CSDC2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding