Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	7551
Gene Name:	zinc finger protein 3
Gene Aliases:	A8-51, HF.12, KOX25, PP838, Zfp113
Location:	Chr.7:100063847-100082548 on Build GRCh38
Assay Gene Location:	Within Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNF3	NM_001278284.1			NP_001265213.1
	NM_001278287.1			NP_001265216.1
	NM_001278290.1			NP_001265219.1
	NM_001278291.1			NP_001265220.1
	NM_001278292.1			NP_001265221.1
	NM_001318135.1			NP_001305064.1
	NM_001318136.1	2	469	NP_001305065.1
	NM_001318137.1			NP_001305066.1
	NM_017715.3			NP_060185.2
	NM_032924.4			NP_116313.3
	XM_006716111.1			XP_006716174.1
	XM_017012582.1			XP_016868071.1
	XM_017012583.1			XP_016868072.1
	AF193057.1			AAG22485.1
	AF217988.1			AAG17231.1
	AK000223.1			BAA91019.1
	AK091984.1	2	441
	AK297625.1
	AK309719.1
	AK315479.1
	BC011887.2			AAH11887.2
	BC013603.1
	BQ071498.1
	BT006918.1			AAP35564.1
	BX647182.1			CAH10562.1
	CB129643.1
	CB988353.1	2	469
	DA443888.1
	DA623743.1
	DC347416.1
	DC384519.1
	HY096067.1
	X60153.1			CAB94195.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv607931	Chr.7:100067194 - 100198523 on Build GRCh38	Loss	LAMTOR4 CNPY4 MIR93 MIR25 MIR106B MBLAC1 C7orf43 GAL3ST4 GPC2 AP4M1 COPS6 TAF6 ZNF3 MCM7 STAG3 GATS MIR4658
nsv469687	Chr.7:99974920 - 100157518 on Build GRCh38	Loss	LAMTOR4 ZSCAN21 CNPY4 AZGP1P1 MIR93 AZGP1 MIR25 MIR106B MBLAC1 C7orf43 ZKSCAN1 AP4M1 COPS6 TAF6 ZNF3 MCM7 MIR4658
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	LRCH4 AZGP1 LOC105375429 ACTL6B PILRB POP7 MUC12 PCOLCE-AS1 MOGAT3 EPHB4 ZCWPW1 ZKSCAN1 SERPINE1 AGFG2 MIR6875 MCM7 GNB2 ZSCAN21 UFSP1 CNPY4 MIR6840 NAT16 TFR2 MUC17 MIR25 MBLAC1 PPP1R35 MEPCE GAL3ST4 FIS1 LOC102724094 COPS6 TAF6 ACHE MUC3A SLC12A9 GIGYF1 LAMTOR4 AZGP1P1 MIR106B FBXO24 ZAN PMS2P1 C7orf43 SPDYE3 CLDN15 NYAP1 SAP25 C7orf61 PVRIG2P MIR4653 TRIP6 STAG3 GATS PILRA PLOD3 MIR4658 PVRIG AP1S1 MOSPD3 PCOLCE MIR93 TRIM56 VGF ZASP GPC2 EPO AP4M1 STAG3L5P-PVRIG2P-PILRB STAG3L5P SRRT TSC22D4 ZNF3 ZNHIT1

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More Information

Additional Information:

For this assay, SNP(s) [rs143321364] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.