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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30643676 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02958682_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 9 1846 NP_001177653.1
NM_001254952.2 10 1091 NP_001241881.1
NM_001318762.1 9 1608 NP_001305691.1
NM_001318763.1 10 1677 NP_001305692.1
NM_024909.3 11 1160 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 11 1116 BAE45758.1
AK023220.1 10 1643 BAB14472.1
AK225107.1 11 1124
AK298743.1 10 1057
AL833858.1 11 1112 CAD38717.1
BC006105.1 9 1619 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX418089.2 1 962
BX418559.2
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss DHX16 IER3 MDC1-AS1 PPP1R18 C6orf136 ABCF1 FLOT1 MDC1 MRPS18B PPP1R10 ATAT1 HCG20 NRM TUBB
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion DHX16 HLA-B PSORS1C3 C6orf136 HCG22 DPCR1 MAS1L ZNRD1 MRPS18B HLA-H DDR1 OR12D3 NRM UBD HCG8 HCG17 MIR877 TRIM15 MOG IER3 RNF39 MIR6891 HLA-L OR10C1 OR2H1 ZFP57 TRIM26 HLA-K FLOT1 GTF2H4 MUC22 VARS2 HLA-F HLA-A CDSN HLA-F-AS1 LOC554223 PSORS1C2 TUBB C6orf15 TRIM39 CCHCR1 MUC21 OR5V1 MDC1-AS1 MIR4640 PPP1R18 OR14J1 HLA-E ABCF1 HLA-C SFTA2 LOC101929006 MICA TRIM39-RPP21 RPP21 GABBR1 HCG4B PPP1R10 PPP1R11 OR12D2 ZNRD1ASP IFITM4P TCF19 TRIM10 HCG18 POU5F1 HLA-J LINC00243 HCG4 LOC105375014 OR2J2 TRIM31 OR2H2 MDC1 HCG9 GNL1 TRIM31-AS1 HLA-G PRR3 ATAT1 HCG27 LINC01015 HCG20 OR11A1 PSORS1C1 SNORD32B TRIM40
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss CCHCR1 DHX16 MUC21 PSORS1C3 MDC1-AS1 MIR4640 PPP1R18 C6orf136 HLA-E ABCF1 HCG22 DPCR1 HLA-C SFTA2 MRPS18B PPP1R10 DDR1 NRM TCF19 MIR877 POU5F1 IER3 LINC00243 LOC105375014 FLOT1 GTF2H4 MDC1 GNL1 MUC22 VARS2 PRR3 ATAT1 HCG27 CDSN HCG20 PSORS1C2 PSORS1C1 TUBB C6orf15
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion DHX16 TRIM27 PSORS1C3 C6orf136 OR2B3 HCG22 DPCR1 MAS1L ZNRD1 MRPS18B HLA-H HCG16 DDR1 OR12D3 NRM UBD HCG8 HCG17 MIR877 TRIM15 HCG14 MOG OR2J3 IER3 RNF39 HLA-L OR10C1 OR2H1 LOC100129636 ZFP57 TRIM26 HLA-K FLOT1 GTF2H4 ZNF311 MUC22 VARS2 HLA-F HLA-A LINC01623 CDSN HLA-F-AS1 LOC554223 PSORS1C2 TUBB C6orf15 TRIM39 CCHCR1 MUC21 OR5V1 MDC1-AS1 MIR4640 PPP1R18 OR14J1 HLA-E ABCF1 SFTA2 LOC101929006 OR2W1 TRIM39-RPP21 RPP21 GABBR1 HCG4B PPP1R10 PPP1R11 OR12D2 ZNRD1ASP IFITM4P TCF19 TRIM10 LINC01556 HCG18 POU5F1 HLA-J LINC00243 HCG4 LOC105375014 OR2J2 TRIM31 OR2H2 MDC1 HCG9 GNL1 TRIM31-AS1 HLA-G LINC00533 PRR3 ATAT1 HCG27 LINC01015 HCG20 OR11A1 PSORS1C1 SNORD32B TRIM40
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion DHX16 PSORS1C3 C6orf136 HCG22 DPCR1 ZNRD1 MRPS18B HLA-H DDR1 NRM HCG8 HCG17 MIR877 TRIM15 IER3 RNF39 HLA-L TRIM26 HLA-K FLOT1 GTF2H4 MUC22 VARS2 HLA-F HLA-A CDSN HLA-F-AS1 LOC554223 PSORS1C2 TUBB C6orf15 TRIM39 CCHCR1 MUC21 MDC1-AS1 MIR4640 PPP1R18 HLA-E ABCF1 HLA-C SFTA2 TRIM39-RPP21 RPP21 HCG4B PPP1R10 PPP1R11 ZNRD1ASP IFITM4P TCF19 TRIM10 HCG18 POU5F1 HLA-J LINC00243 HCG4 LOC105375014 TRIM31 MDC1 HCG9 GNL1 TRIM31-AS1 HLA-G PRR3 ATAT1 HCG27 HCG20 PSORS1C1 TRIM40
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion CCHCR1 DHX16 MUC21 PSORS1C3 MDC1-AS1 MIR4640 PPP1R18 C6orf136 HLA-E ABCF1 HCG22 DPCR1 HLA-C SFTA2 MRPS18B PPP1R10 DDR1 NRM TCF19 MIR877 POU5F1 IER3 LINC00243 LOC105375014 FLOT1 GTF2H4 MDC1 GNL1 MUC22 VARS2 PRR3 ATAT1 HCG27 CDSN HCG20 PSORS1C2 PSORS1C1 TUBB C6orf15
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss DHX16 PSORS1C3 C6orf136 HCG22 DPCR1 ZNRD1 MRPS18B HLA-H DDR1 NRM HCG8 HCG17 MIR877 TRIM15 IER3 RNF39 HLA-L TRIM26 HLA-K FLOT1 GTF2H4 MUC22 VARS2 HLA-A CDSN PSORS1C2 TUBB C6orf15 TRIM39 CCHCR1 MUC21 MDC1-AS1 MIR4640 PPP1R18 HLA-E ABCF1 HLA-C SFTA2 TRIM39-RPP21 RPP21 HCG4B PPP1R10 PPP1R11 ZNRD1ASP TCF19 TRIM10 HCG18 POU5F1 HLA-J LINC00243 LOC105375014 TRIM31 MDC1 HCG9 GNL1 TRIM31-AS1 PRR3 ATAT1 HCG27 HCG20 PSORS1C1 TRIM40
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion DHX16 MUC21 MDC1-AS1 MIR4640 PPP1R18 C6orf136 ABCF1 HCG22 DPCR1 SFTA2 MRPS18B PPP1R10 DDR1 NRM MIR877 IER3 LINC00243 LOC105375014 FLOT1 GTF2H4 MDC1 GNL1 MUC22 VARS2 PRR3 ATAT1 HCG20 TUBB
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication DHX16 HLA-B PSORS1C3 C6orf136 HCG22 DPCR1 ZNRD1 MRPS18B DDR1 NRM HCG8 HCG17 MIR877 TRIM15 IER3 RNF39 MIR6891 HLA-L TRIM26 FLOT1 GTF2H4 MUC22 VARS2 CDSN PSORS1C2 TUBB C6orf15 TRIM39 CCHCR1 LOC102725068 MUC21 MDC1-AS1 MIR4640 PPP1R18 HLA-E ABCF1 HLA-C SFTA2 HCG26 MICA TRIM39-RPP21 RPP21 PPP1R10 PPP1R11 ZNRD1ASP TCF19 TRIM10 HCG18 HCP5 POU5F1 HLA-J LINC00243 LOC105375014 TRIM31 MDC1 GNL1 TRIM31-AS1 PRR3 ATAT1 HCG27 HCG20 PSORS1C1 TRIM40

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