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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30643676 on build GRCh38
Cytoband
6p21.33
Assay ID Hs02958682_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 9 1846 NP_001177653.1
NM_001254952.2 10 1091 NP_001241881.1
NM_001318762.1 9 1608 NP_001305691.1
NM_001318763.1 10 1677 NP_001305692.1
NM_024909.3 11 1160 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 11 1116 BAE45758.1
AK023220.1 10 1643 BAB14472.1
AK225107.1 11 1124
AK298743.1 10 1057
AL833858.1 11 1112 CAD38717.1
BC006105.1 9 1619 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX418089.2 1 962
BX418559.2
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion PPP1R10 TRIM39 DDR1 C6orf15 TUBB HLA-A IER3 HLA-K PPP1R11 HCG18 UBD OR2H2 ZNRD1 MUC22 TRIM31 HCG27 MAS1L HLA-C MIR4640 GNL1 LINC01015 CDSN OR2H1 TRIM40 RPP21 HLA-J TRIM39-RPP21 LOC101929006 FLOT1 LOC105375014 HCG9 HLA-H HCG4 CCHCR1 TRIM15 NRM GTF2H4 HLA-F-AS1 SNORD32B HLA-L MDC1 OR2J2 MDC1-AS1 HLA-E POU5F1 OR14J1 DHX16 OR5V1 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 ATAT1 TCF19 HCG4B LINC00243 OR11A1 IFITM4P HLA-F ZNRD1ASP OR12D2 HCG22 ZFP57 MIR877 LOC554223 TRIM31-AS1 PSORS1C2 DPCR1 OR12D3 GABBR1 HCG8 VARS2 OR10C1 MOG MRPS18B HLA-B HLA-G TRIM10 MUC21 MICA MIR6891 HCG17 SFTA2 TRIM26 RNF39 PSORS1C1 PRR3
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss PPP1R10 TUBB MDC1 MDC1-AS1 IER3 DHX16 MRPS18B FLOT1 PPP1R18 C6orf136 HCG20 ABCF1 ATAT1 NRM
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss PPP1R10 DDR1 C6orf15 GTF2H4 TUBB MDC1 MDC1-AS1 HLA-E POU5F1 IER3 DHX16 MUC22 HCG27 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 HLA-C MIR4640 ATAT1 GNL1 TCF19 LINC00243 CDSN HCG22 MIR877 PSORS1C2 DPCR1 VARS2 MRPS18B FLOT1 LOC105375014 MUC21 SFTA2 CCHCR1 PSORS1C1 NRM PRR3
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion PPP1R10 TRIM39 DDR1 C6orf15 TUBB HLA-A IER3 HLA-K TRIM27 PPP1R11 HCG18 UBD OR2W1 OR2H2 ZNRD1 MUC22 TRIM31 HCG27 MAS1L LINC01556 LINC00533 ZNF311 MIR4640 GNL1 LINC01015 CDSN OR2H1 TRIM40 RPP21 HLA-J TRIM39-RPP21 LOC101929006 FLOT1 LOC105375014 HCG9 HCG16 HLA-H HCG4 CCHCR1 TRIM15 NRM GTF2H4 HLA-F-AS1 SNORD32B HLA-L MDC1 OR2J2 MDC1-AS1 HLA-E POU5F1 OR14J1 DHX16 OR5V1 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 ATAT1 TCF19 HCG4B LINC00243 OR11A1 IFITM4P HLA-F ZNRD1ASP OR12D2 HCG22 ZFP57 MIR877 LOC554223 TRIM31-AS1 PSORS1C2 DPCR1 OR12D3 GABBR1 HCG8 VARS2 OR10C1 MOG MRPS18B HLA-G TRIM10 MUC21 LINC01623 OR2J3 OR2B3 HCG14 LOC100129636 HCG17 SFTA2 TRIM26 RNF39 PSORS1C1 PRR3
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion PPP1R10 TRIM39 DDR1 C6orf15 TUBB HLA-A IER3 HLA-K PPP1R11 HCG18 ZNRD1 MUC22 TRIM31 HCG27 HLA-C MIR4640 GNL1 CDSN TRIM40 RPP21 HLA-J TRIM39-RPP21 FLOT1 LOC105375014 HCG9 HLA-H HCG4 CCHCR1 TRIM15 NRM GTF2H4 HLA-F-AS1 HLA-L MDC1 MDC1-AS1 HLA-E POU5F1 DHX16 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 ATAT1 TCF19 HCG4B LINC00243 IFITM4P HLA-F ZNRD1ASP HCG22 MIR877 LOC554223 TRIM31-AS1 PSORS1C2 DPCR1 HCG8 VARS2 MRPS18B HLA-G TRIM10 MUC21 HCG17 SFTA2 TRIM26 RNF39 PSORS1C1 PRR3
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss PPP1R10 TRIM39 DDR1 C6orf15 TUBB HLA-A IER3 HLA-K PPP1R11 HCG18 ZNRD1 MUC22 TRIM31 HCG27 HLA-C MIR4640 GNL1 CDSN TRIM40 RPP21 HLA-J TRIM39-RPP21 FLOT1 LOC105375014 HCG9 HLA-H CCHCR1 TRIM15 NRM GTF2H4 HLA-L MDC1 MDC1-AS1 HLA-E POU5F1 DHX16 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 ATAT1 TCF19 HCG4B LINC00243 ZNRD1ASP HCG22 MIR877 TRIM31-AS1 PSORS1C2 DPCR1 HCG8 VARS2 MRPS18B TRIM10 MUC21 HCG17 SFTA2 TRIM26 RNF39 PSORS1C1 PRR3
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion PPP1R10 DDR1 C6orf15 GTF2H4 TUBB MDC1 MDC1-AS1 HLA-E POU5F1 IER3 DHX16 MUC22 HCG27 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 HLA-C MIR4640 ATAT1 GNL1 TCF19 LINC00243 CDSN HCG22 MIR877 PSORS1C2 DPCR1 VARS2 MRPS18B FLOT1 LOC105375014 MUC21 SFTA2 CCHCR1 PSORS1C1 NRM PRR3
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion PPP1R10 DDR1 GTF2H4 TUBB MDC1 MDC1-AS1 IER3 DHX16 MUC22 PPP1R18 C6orf136 HCG20 ABCF1 MIR4640 ATAT1 GNL1 LINC00243 HCG22 MIR877 DPCR1 VARS2 MRPS18B FLOT1 LOC105375014 MUC21 SFTA2 NRM PRR3
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication PPP1R10 TRIM39 DDR1 C6orf15 TUBB IER3 PPP1R11 HCG18 ZNRD1 MUC22 TRIM31 HCG27 HLA-C MIR4640 GNL1 CDSN TRIM40 RPP21 HLA-J TRIM39-RPP21 FLOT1 LOC105375014 HCG26 LOC102725068 CCHCR1 TRIM15 NRM GTF2H4 HLA-L MDC1 MDC1-AS1 HLA-E POU5F1 DHX16 PPP1R18 C6orf136 HCG20 PSORS1C3 ABCF1 ATAT1 TCF19 LINC00243 ZNRD1ASP HCG22 MIR877 TRIM31-AS1 PSORS1C2 DPCR1 HCG8 VARS2 MRPS18B HLA-B TRIM10 HCP5 MUC21 MICA MIR6891 HCG17 SFTA2 TRIM26 RNF39 PSORS1C1 PRR3

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