Hs02977852_cn

• Gene Symbol: EDC4
• Assay Reference Genome Location: Chr.16:67878437 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 23644
• Gene Name: enhancer of mRNA decapping 4
• Gene Aliases: GE1, Ge-1, HEDL5, HEDLS, RCD-8, RCD8
• Location: Chr.16:67873023-67884514 on Build GRCh38
• Assay Gene Location: Overlaps Exon 9 - Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EDC4	NM_014329.4			NP_055144.3
	AK128582.1
	AK291049.1
	AK302563.1
	BC043616.1			AAH43616.1
	BC053598.1			AAH53598.1
	BC064567.1			AAH64567.1
	L26339.1			AAA21833.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	DDX28 EDC4 ACD LOC107984813 LOC100131303 ENKD1 DUS2 GFOD2 MIR328 TSNAXIP1 PLEKHG4 SLC9A5 C16orf86 FBXL8 PARD6A ELMO3 SLC12A4 HSF4 TPPP3 AGRP TRADD ZDHHC1 E2F4 TMEM208 LRRC36 HSD11B2 RANBP10 PSMB10 DPEP2 EXOC3L1 LCAT ATP6V0D1 KCTD19 NOL3 CTRL PSKH1 THAP11 LOC100505942 LOC105369155 LRRC29 CARMIL2 CTCF FAM65A DPEP3 NUTF2 NRN1L CENPT KIAA0895L FHOD1
nsv1844	Chr.16:67868325 - 67917356 on Build GRCh38	Deletion	EDC4 PSKH1 NUTF2 NRN1L
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	B3GNT9 DDX28 EDC4 ACD LOC107984813 LOC100131303 ENKD1 DUS2 GFOD2 MIR328 C16orf70 TSNAXIP1 PLEKHG4 SLC9A5 C16orf86 FBXL8 PARD6A ELMO3 SLC12A4 HSF4 TPPP3 AGRP TRADD ZDHHC1 E2F4 TMEM208 LRRC36 HSD11B2 RANBP10 PSMB10 DPEP2 EXOC3L1 LCAT ATP6V0D1 KCTD19 NOL3 CTRL PSKH1 THAP11 LOC100505942 LOC105369155 LRRC29 CARMIL2 CTCF FAM65A DPEP3 NUTF2 NRN1L CENPT KIAA0895L FHOD1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

mRNA capping factor

Gene Ontology Categories:

Process(es)

biological_process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay

Function(s)

protein binding